Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral918g00003 ATGGGAAGCGGACTTTCTAGCCTCCTTCCTTGCTGCAAACCGGCTAACCGGACCACCAGCGAACCGGATCAGCAGGAAGTGATCTTTGCCGCCACTGAGCCCTTGGACGAAACCCTAGGCCACTCCTTCTGCTACGTTAGATCTTCCGCTCGCTTTCTTTCCCCCACTCACTCGGATCGATTCGTCTCGCCTTCTAACTCCCTCCGCTTTTCTCCTCCTCATGAACCCGTATCGAGGGCCCGACCCGATTTGCCCGAAACCGTCTTCAAGGCCATTTCCGGAGCTTCCGTTAGCGCCAACAGTTCCACTCCCAAAACTGTTCTCCAGCTGGACAATATCCACGATGATGTTGCGGACTGTGCCGCTGGTGGCGGCGTGAGGGGAAACATTGTGAATGGCTTCGAGAGCACATCATCGTTCAGTGCTCTCCCGCTTCAGCCAGTCCCCCGGGGGGGTGACCCCTCAGGTCCGGTAGATAGGGGAGCCTTCTTTCTGTCTGGCCCAATTGAACGCGGCGCCCTCTCTGGCCCCCTCGAGCCCAACGCCACCACCGAAGGTGGAGGCGGCGTCCCTTTCTCGGCGCCTCTTGGTGGCATTTATGTCAAAAAGAAGCGGAAGAGGAGCATTTCGGGGTTTCGGAAGGCATTCCATGGGAACCTTTCGGAGAAGAAGCGGCCATGGGTTGTGCCAGTGTTAAATTTCGTAGGAAGAAAGGATGTTACGGCAAGCGAAGAGAAATCGGAGATAAAGAGTGAGAGTAATGTACAGTGGGCGCATGGGAAGGCGGGAGAGGATCGGGTACACGTAGTTGTTTCGGAAGAGCACGGCTGGTTGTTTGTTGGTATATACGACGGCTTCAATGGCCCTGACGCGCCGGAATTTCTGATGGGTCATCTATACCGTGCAGTGTACAATGAATTACAGGGTCTGTTTTGGGAAGCTGAAGAAGCGGAGGAAAATAATAACCCATCGACCGCCCCTGCGGAGAATGCATTACTTGGAGAACAATCTGAACCATCGATTGAAATCTCCCACGCAGACTTAAAAAATGAGGGGGGCGTATCTGTGAGTAGAGAGGACTTAAATTCTTTGCCTGCTGATGGAGAATCAGCAAAGAGAGTAACGTTTCAAGCGGACGGAACGGAAAGTAGGCGGCGTAGATTATGGGAGTTACTCGCCGAAGCTGATGCTGAAGACGGGCTTGATCTTTCTGGGTCAGATAGATTTGCATTTTCCGTTGATGATGCTCTGAGCGTAAGCAATGCGGGCTCAGCCGTTAGCAGACGATGGCTATTATTATCGAAGTTGAAACATGGATTATCAAAACATAAGGAGGGTCAAGGTAGCAAGTTGTTTCCCTGGAAACTAGGCACAGAAGATAAAGAGAAGGTTGAGTTGGAAAATCGGGCTGAAGAAAAACCATCCCGTGGCAATAGGAGGCGGAAAGTGGGTCCCGTGGATCATGATTCGGTTTTGAGAGCATTATCTCGGGCTCTTGAATTGACCGAACTTGCATACTTGGATATGACGGACAAGATTCTTGATACAAGCCCGGAGATCGCTTTAATGGGGTCATGTCTGTTAGTTGTTTTAATGAGGGATGAAGATGTTTACGTGATGAATGTGGGAGACAGCCGAGCCATTGTTGCACAGCATGAGCCCAGAGAGGCTAATTCTAGCGTGGAATTGGAGAGCAAAGGAGATAAGGGGTCAAGCACAGAGAGCATAGTTGAGGAGTCCTCAGCTCCTGGTGAAAGTGCAAACAAGTCGGGGATTGAGGATCCTGCTCAAGAAATGAGGTTGATTGCATTGCAGCTGTCCACTGACCACAGCACGAGCATTGAAGAGGAAGTCATTAGGATTAAGAATGAACATCCAGATGATAACCAATGCATTGTAAATGACAGAGTTAAAGGTCGTCTTAAGGTTACCAGAGCATTTGGGGCAGGATTTTTGAAACAGCCAAAGTGGAATGATCCTTTACTGGAAATGTTTCGTAATGAATATATTGGCACTGCTCCATATATATCCTGCTGCCCTTCGCTACGTCATCATAGATTATGCCCAAGAGATCAGTTCCTGATCCTCTCATCTGATGGGTTATATCAATATCTAAGCAATCAAGAAGTGGTTTCTCAAGTTGAGAGCTTCATGGAAAAGTTTCCTGATGGAGATCCTGCTCAACATTTGATTGAGGAGCTTCTCCTCCGTGCAGCAAAGAAAGCTGGAATGGATTTACATGACTTGTTGGATATCCCACAAGGAGATAGGAGGAAATACCATGATGATGTTACTGTCATGGTGATATCACTTGAAGGCCGAATCTGGAAATCATCAGGAAAGTATCTGTGA 2352 0.4906 MGSGLSSLLPCCKPANRTTSEPDQQEVIFAATEPLDETLGHSFCYVRSSARFLSPTHSDRFVSPSNSLRFSPPHEPVSRARPDLPETVFKAISGASVSANSSTPKTVLQLDNIHDDVADCAAGGGVRGNIVNGFESTSSFSALPLQPVPRGGDPSGPVDRGAFFLSGPIERGALSGPLEPNATTEGGGGVPFSAPLGGIYVKKKRKRSISGFRKAFHGNLSEKKRPWVVPVLNFVGRKDVTASEEKSEIKSESNVQWAHGKAGEDRVHVVVSEEHGWLFVGIYDGFNGPDAPEFLMGHLYRAVYNELQGLFWEAEEAEENNNPSTAPAENALLGEQSEPSIEISHADLKNEGGVSVSREDLNSLPADGESAKRVTFQADGTESRRRRLWELLAEADAEDGLDLSGSDRFAFSVDDALSVSNAGSAVSRRWLLLSKLKHGLSKHKEGQGSKLFPWKLGTEDKEKVELENRAEEKPSRGNRRRKVGPVDHDSVLRALSRALELTELAYLDMTDKILDTSPEIALMGSCLLVVLMRDEDVYVMNVGDSRAIVAQHEPREANSSVELESKGDKGSSTESIVEESSAPGESANKSGIEDPAQEMRLIALQLSTDHSTSIEEEVIRIKNEHPDDNQCIVNDRVKGRLKVTRAFGAGFLKQPKWNDPLLEMFRNEYIGTAPYISCCPSLRHHRLCPRDQFLILSSDGLYQYLSNQEVVSQVESFMEKFPDGDPAQHLIEELLLRAAKKAGMDLHDLLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral918g00003 783 CDD PP2Cc 487 771 IPR001932 -
Pral918g00003 783 SUPERFAMILY PP2C-like 260 772 IPR036457 -
Pral918g00003 783 MobiDBLite consensus disorder prediction 551 591 - -
Pral918g00003 783 PANTHER PROTEIN PHOSPHATASE 2C 245 770 IPR015655 GO:0004722|GO:0006470
Pral918g00003 783 MobiDBLite consensus disorder prediction 1 22 - -
Pral918g00003 783 MobiDBLite consensus disorder prediction 465 484 - -
Pral918g00003 783 Gene3D - 235 778 IPR036457 -
Pral918g00003 783 ProSiteProfiles PPM-type phosphatase domain profile. 248 771 IPR001932 -
Pral918g00003 783 SMART PP2C_4 248 769 IPR001932 -
Pral918g00003 783 MobiDBLite consensus disorder prediction 557 573 - -
Pral918g00003 783 Pfam Protein phosphatase 2C 498 553 IPR001932 -
Pral918g00003 783 Pfam Protein phosphatase 2C 605 739 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral918g00003 Pral-Chr918 22440 28037 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral918g00003 1 783 PP2C-type Phosphatase Gene Family AT2G35350 58.213 0.0 851
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral918g00003 - - qsa:O6P43_024469 1183.32