Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pral918g00001 | GACAAGCAGCCGTTGCCATGGGAAATGCGTGTAAGAGTTGCATACCATGTAGCCCAGGCACTAGATCATTGTAGCATGGAAAATCGCATATATCATGATTTGAATGCATACAGGATTCTTTTCGATGAGGAAGGCGACCCCCGATTGTCTAGTTTCGGGCTTATGAAAAATAGTCGAGATGGGAAAAGCTACAGTACCAACTTAGCATATACTCCACCTGAGTTTTTGCGGACAGGCAGGATTATTCCAGAGAGTGTAATCTACAGTTATGGAACAGTTCTTTTGGATCTTTTGAGCGGCAAGCATATTCCTCCAAGCCATGCTCTTGATCTGATTAGAGGTAAAAATGCCTTGTTGCTGATGGACTCGTCGCTAGAAGGGCAATACGCAAATGATGATGCTACAAAGTTGGTTGAGCTTGCTTCAAAATGTCTTCAGTTTGAGGCTAGAGAACGCCCAGATATTAAGTTTCTTCTTACAGCAGTTGCACCTCTTCAAAAGCAGAAAGAGGTAGCATCTCATGTGTTGATGGGCCTAACTAAAAACACAGCGGTGCTACCAACCATGCTGTCACCCCTAGGAAAGGCTTGTGCAAGGATGGATCTCACAGCTGTGCATGATATATTGCTAAAAACAGGTTAAGATGAAGAAGGTGCTGAGAATGAGCTTTCGTTCCAAGAATGGACACAACAAGTGCAAGAGATCCTGAACACGAAAAAATTTGGGGACATTGCATTCAGAGACAAGGATTTCAAGAACGCAATTGAGTATTATTCTAAGTTGGTGGTGATGATGTCGGTTCCTTCGGCTACTGTATTTGCAAGAAGAGCGTTCTCATACTTGATGAACGAGCAGGCAGAACTGGCGTTACGGGATGCAATGCAGGCACAGGTGTGCATTCCTGATTGGCCAACAGCATTCTACCTGCAGGCCCTTGCTCTCTCCAAGCTGGGAATGGAGACTGATGCTCAGGATATGCTCAATGATGGAGCTGCCTTTGAAGCCAAGCGGTCTAACAGTTGGCGTGGTTAA | 1032 | 0.4506 | DKQPLPWEMRVRVAYHVAQALDHCSMENRKXYHDLNAYRILFDEEGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRIIPESVIYSYGTVLLDLLSGKHIPPSHALDLIRGKNALLLMDSSLEGQYANDDATKLVELASKCLQFEARERPDIKFLLTAVAPLQKQKEVASHVLMGLTKNTAVLPTMLSPLGKACARMDLTAVHDILLKTGYXDEEGAENELSFQEWTQQVQEILNTKKFGDIAFRDKDFKNAIEYYSKLVVMMSVPSATVFARRAFSYLMNEQAELALRDAMQAQVCIPDWPTAFYLQALALSKLGMETDAQDMLNDGAAFEAKRSNSWRG | 345 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pral918g00001 | 345 | Pfam | Protein kinase domain | 12 | 159 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Pral918g00001 | 345 | PANTHER | SERINE/THREONINE-PROTEIN KINASE BSK5 | 1 | 340 | IPR045845 | GO:0004672|GO:0009742 | |
| Pral918g00001 | 345 | FunFam | probable serine/threonine-protein kinase At4g35230 | 235 | 344 | - | - | |
| Pral918g00001 | 345 | Gene3D | Tetratricopeptide repeat domain | 235 | 344 | IPR011990 | GO:0005515 | |
| Pral918g00001 | 345 | SUPERFAMILY | TPR-like | 240 | 334 | IPR011990 | GO:0005515 | |
| Pral918g00001 | 345 | FunFam | probable serine/threonine-protein kinase At5g41260 | 1 | 180 | - | - | |
| Pral918g00001 | 345 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 181 | - | - | |
| Pral918g00001 | 345 | ProSiteProfiles | Protein kinase domain profile. | 1 | 178 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Pral918g00001 | 345 | SUPERFAMILY | Protein kinase-like (PK-like) | 4 | 163 | IPR011009 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pral918g00001 | Pral-Chr918 | 306 | 3522 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pral918g00001 | 5 | 197 | Receptor kinase-like Gene Family | AT3G58690 | 31.193 | 6.97e-21 | 90.9 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| PK | RLK-Pelle_RLCK-XII-1 | Pral918g00001 | Pkinase | 1.4e-12 | CL0016 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pral918g00001 | K14500 | - | gmx:100793576 | 673.315 |