Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral916g00029 ATGAGCTCCTCACCACAGGCTATCACTTGCAAAGGTGCCATATGTTGGGCAATAGGAGAGGGAGTGAAGGAGGAGGAGATAGAAGTAGAGCCTCCAAAAGCTTCAGAAGTTCGAGTTAAGATGCTTTGTGCTAGTGTTTGCCATTCAGACATCTTTGCCACTCAAGGACTCCCACATGCCAATTATCCTCAAGTTCTAGGCCATGAAGGAATTGGTGTTGTGGAGAGCAAAGGGGAGGAAGTGAAGAATGTGAAGGTAGGGGATATGGTGATTCCACTGTACCTATCAGAGTGTGGAGAATGTGAGGTTTGCATAAAAGGGAAGACCAACTTATGCATGAGATACCCTATAAGGTTGAATGGGTTGATGGCAGACAACACTTCTAGAATGTCTGTGAGAGGTCAAAAGGCATATCATCTCATGAGTTGTGCCACATGGTGTGAGTATATGGTCATTGATGCTAACTATGTTCTTAAAGTTGAATCATCAGCCATTGATGCAGCTCATGGCAGCTTCATCTCTTGTGGTTTCTCTACTGGTTTTGGGGCTGCCTGGAAAGAAGCCATGGTTGAAGAAGGATCCAGTGTTGCTGTTTTTGGTCTTGGTGCTGTTGGATTAGGGGCTGTAAGTGCAGCAAAATTGATGGGGGCAACGAAGATAATTGGGATCGACAAAAATGAGAAGAAGAGAGAAAAGGGAGAAGCTTTTGGAATGACACACTTCATAAATCCTGACAAGTTATCAGATAAACCTCTTTCAGAGGAAGTCAAAGAACTAAGTGGTGAAATAGGGGGAGTGGATTATTCTATTGAATGCACGGGAGTTCCCTCTTTGCTCAACGAAGCCATGGAATCTACTAAAGTGGGAGTGGGCAAAACTGTAGTGGTAGGTGCAGGAGCTGAATCTGTGCAGTTGAGTTATGGCACCATTCTTTATGGAAGAACATTGAAAGGTTCTGTATTTGGAGGAATAAAGCCCATCTCTGATCTTCCTTTTATAGCTCACAAGTGTCACACAAAGGAAATTCCAATTCATGAACTTTTAACCCATGAGATCCACTTGGAAGATATAAGCAAAGCATTTGGGCTAATGAGACATCCATATTGCGTCAAAGTTGTGATCAAGATATGA 1131 0.4315 MSSSPQAITCKGAICWAIGEGVKEEEIEVEPPKASEVRVKMLCASVCHSDIFATQGLPHANYPQVLGHEGIGVVESKGEEVKNVKVGDMVIPLYLSECGECEVCIKGKTNLCMRYPIRLNGLMADNTSRMSVRGQKAYHLMSCATWCEYMVIDANYVLKVESSAIDAAHGSFISCGFSTGFGAAWKEAMVEEGSSVAVFGLGAVGLGAVSAAKLMGATKIIGIDKNEKKREKGEAFGMTHFINPDKLSDKPLSEEVKELSGEIGGVDYSIECTGVPSLLNEAMESTKVGVGKTVVVGAGAESVQLSYGTILYGRTLKGSVFGGIKPISDLPFIAHKCHTKEIPIHELLTHEIHLEDISKAFGLMRHPYCVKVVIKI 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral916g00029 376 Pfam Alcohol dehydrogenase GroES-like domain 35 160 IPR013154 -
Pral916g00029 376 Pfam Zinc-binding dehydrogenase 203 323 IPR013149 -
Pral916g00029 376 FunFam alcohol dehydrogenase 1-like isoform X1 18 179 - -
Pral916g00029 376 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Pral916g00029 376 Gene3D - 14 371 - -
Pral916g00029 376 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 166 336 IPR036291 -
Pral916g00029 376 PANTHER ALCOHOL DEHYDROGENASE 6 366 - -
Pral916g00029 376 FunFam S-(hydroxymethyl)glutathione dehydrogenase 180 319 - -
Pral916g00029 376 Gene3D - 180 319 - -
Pral916g00029 376 SUPERFAMILY GroES-like 5 165 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral916g00029 Pral-Chr916 373314 378035 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral916g00029 36 336 Monolignol Biosynthesis Gene Families AT4G37990 27.451 2.49e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral916g00029 K00121 - gmx:100798341 467.618