Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral916g00013 ATGGCAAGCAGCTCCCAAGCTATAACTTGCAAAGGAGCAATATGTTGGGAAATAGGAGAGGCAGTGAAGGTAGAAGAGATACAAGTAGCTCCTCCAAAAGCCACCGAAGTTCGTGTTAAGATGCTCTTTGCTAGTATCTGCCACACAGACTTCTTGAGAGCTCGAGGCCACCCATATCCCTCTTTTCCTCTTGCACTAGGCCATGAAGGTGTAGGTGTTGTGGAGAGCGTGGGGGAAGAAGTGAAAGATTTCAAAGAAGGAGATGTGGTGATTCCCATATACATTGGGGAATGTGGAGAATGTGAGAATTGTGTTTCAGAGGAATCAAACTTATGCCTGAGATATCCTTTAAGAGTGAGTGGGCTAATGCCTGATGACACATCAAGGATTTCTGTTAGAGGGGAAAAGGCTTACCATGTGTTTAGCTGCTCAACATGGTGCGAGTACATGGTTAGTGATGAAAAATATCTTATGAAAGTTGATCCAAGTATTGATTTGGCTCATGCTAGCTTCATCTCCTGTGGATTCTCTACTGGGTTTGGAGCTTCTTGGAAGACAGGCCAAGTTCAAAGTGGGTCATCTGTGGCTGTTTTCGGCCTTGGAGCTGTTGGATTAGGGGCTATAAGTGGAGCCAAGATGATGGGAGCGACAAAGATAATTGGGATCGACATAAATGAGAAGAAAAGAGAAAAAGGAGAAGCTTTTGGAATGACAGATTTCATAAATCCTAAGGATCATTCTGATAAGCCTTCTTCTCAACTGGTGAAGGACCTCACTGGTGGATTGGGTGTGGATTATGCCATTGAGTGCACTGGTGTTGCCTCTTTGCTCACTCAAGCCCTAGAATCTACTAAAGTGGGGAGAGGAAAGGCAATAGCAATTGGGGTGGGAAGTGAAGAATTTGTTCAAGTCAACTGGTTAGGTCTTCTTCTTGGGAGGACTTTGAAGGGTTCAATTTTTGGAGGCTTGAAACCCCAATCTGACCTTTCCATTTTAGCCGCCAAATGCAAGAACAAGGATTTCCCAATTGAGAAGCTTTTGACCCATGAAGTCCCGTTGACAGAGATAAACAAAGCTTTTGAGCTCTTGAAGCAGCCGGATTGTGTCAAAGTTATTATCAAGATGTGA 1128 0.4406 MASSSQAITCKGAICWEIGEAVKVEEIQVAPPKATEVRVKMLFASICHTDFLRARGHPYPSFPLALGHEGVGVVESVGEEVKDFKEGDVVIPIYIGECGECENCVSEESNLCLRYPLRVSGLMPDDTSRISVRGEKAYHVFSCSTWCEYMVSDEKYLMKVDPSIDLAHASFISCGFSTGFGASWKTGQVQSGSSVAVFGLGAVGLGAISGAKMMGATKIIGIDINEKKREKGEAFGMTDFINPKDHSDKPSSQLVKDLTGGLGVDYAIECTGVASLLTQALESTKVGRGKAIAIGVGSEEFVQVNWLGLLLGRTLKGSIFGGLKPQSDLSILAAKCKNKDFPIEKLLTHEVPLTEINKAFELLKQPDCVKVIIKM 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral916g00013 375 Gene3D - 13 370 - -
Pral916g00013 375 FunFam S-(hydroxymethyl)glutathione dehydrogenase 179 318 - -
Pral916g00013 375 PANTHER ALCOHOL DEHYDROGENASE 6 367 - -
Pral916g00013 375 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 164 337 IPR036291 -
Pral916g00013 375 Gene3D - 179 318 - -
Pral916g00013 375 SUPERFAMILY GroES-like 4 190 IPR011032 -
Pral916g00013 375 Pfam Alcohol dehydrogenase GroES-like domain 35 160 IPR013154 -
Pral916g00013 375 SMART PKS_ER_names_mod 19 373 IPR020843 GO:0016491
Pral916g00013 375 SUPERFAMILY GroES-like 327 373 IPR011032 -
Pral916g00013 375 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Pral916g00013 375 Pfam Zinc-binding dehydrogenase 202 322 IPR013149 -
Pral916g00013 375 CDD liver_alcohol_DH_like 8 374 - -
Pral916g00013 375 FunFam alcohol dehydrogenase 1-like isoform X1 18 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral916g00013 Pral-Chr916 80342 82848 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral916g00013 35 367 Monolignol Biosynthesis Gene Families AT2G21730 26.627 1.87e-19 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral916g00013 K00121 - gmx:100798341 513.457