Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral916g00012 ATGTCAAGCAGCTCACAAGTTATAACTTGCAAAGGGGCAATATGTTGGGGAAAAGGAGAGGGAGTGAAAGTTGAAGAGATACAAGTAGACCCTCCTAAAGCCTCTGAAGCCCGAGTTAAAATGCTCTATGCCAGTTTGTGCCACACAGACATCTTGAGGAGTCGAGGATGCCCATATCCAGTTTTCCCTCAAGCACTGGGGCATGAAGGCGTAGGGGTTGTGGAGAGCATAGGGGAGAAAGTGACAGATCTCAAAGTTGGAGATATAGTGATTCCAATATATATTGGGGAGAGTGGAGAATGTGAGGTCTGTGTTTCAGGGAAATCAAACTTATGCGTGAGATATCCTCTAAGAGTGAATGGCCTTATGCCCGATGATACATCAAGGATTTCCATAAGAGGACAGAAAGTGTACCATGTGTTTAGCTGCTCAACATGGTGTGAGTATATGGTTAGTGATGAGAACTACCTTATGAAAGTTGATCCAAGTATTGATTTGGCTCATGCTAGCTTCATCTCTTGTGGATTCTCTACTGGTTTTGGGGCTGCTTGGCAGACAGCCCAAGTTCAAAGTGGATCATCTGTGGTTGTTTTTGGCCTTGGAGCTGTTGGGTTAGGGGCGATAAGTGGAGCCAAGATGATGGGAGCAACTAAGATAATAGGTGTTGACATCAATGAGAAGAAGAGAGAAAAGGGGAAAGCTTTTGGAATGACAGAATTTATAAATCCTAAGGATCACTCTGATAAGCCTTCTTCTCAGTTGGTGAAGGATCTTACTGGTGGATTAGGTGTGGATTATGCCATTGAGTGCACTGGTGTTGCCCCTCTGCTCACTCAAGCCCTGGAATCCACAAAAGTGGGGGGAGGAAAGGCAATAGTAATCGGTGCAGGAACCGAGGAATTTGTGCAGGTGAACTGGTTAGGTCTTCTTCTTGGAAGAACTTTAAAGGGTTCTGTTTTTGGAGGCTTAAAACCAAAATCTGACCTTCCTGTTTTAGCTGCCAAATGCCTAAACAAGGTGAAATTCTCTGCAGAGAAACCTGAATTGCGATATCTCTCTTGA 1062 0.4435 MSSSSQVITCKGAICWGKGEGVKVEEIQVDPPKASEARVKMLYASLCHTDILRSRGCPYPVFPQALGHEGVGVVESIGEKVTDLKVGDIVIPIYIGESGECEVCVSGKSNLCVRYPLRVNGLMPDDTSRISIRGQKVYHVFSCSTWCEYMVSDENYLMKVDPSIDLAHASFISCGFSTGFGAAWQTAQVQSGSSVVVFGLGAVGLGAISGAKMMGATKIIGVDINEKKREKGKAFGMTEFINPKDHSDKPSSQLVKDLTGGLGVDYAIECTGVAPLLTQALESTKVGGGKAIVIGAGTEEFVQVNWLGLLLGRTLKGSVFGGLKPKSDLPVLAAKCLNKVKFSAEKPELRYLS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral916g00012 353 Pfam Zinc-binding dehydrogenase 202 322 IPR013149 -
Pral916g00012 353 FunFam S-(hydroxymethyl)glutathione dehydrogenase 179 318 - -
Pral916g00012 353 Pfam Alcohol dehydrogenase GroES-like domain 35 160 IPR013154 -
Pral916g00012 353 SMART PKS_ER_names_mod 19 332 IPR020843 GO:0016491
Pral916g00012 353 SUPERFAMILY GroES-like 4 188 IPR011032 -
Pral916g00012 353 PANTHER ALCOHOL DEHYDROGENASE 6 339 - -
Pral916g00012 353 CDD liver_alcohol_DH_like 8 339 - -
Pral916g00012 353 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Pral916g00012 353 Gene3D - 179 318 - -
Pral916g00012 353 Gene3D - 14 339 - -
Pral916g00012 353 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 164 336 IPR036291 -
Pral916g00012 353 FunFam alcohol dehydrogenase 1-like isoform X1 18 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral916g00012 Pral-Chr916 68682 71588 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral916g00012 36 351 Monolignol Biosynthesis Gene Families AT4G37990 25.223 1.94e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral916g00012 K00121 - qsu:112016171 462.996