Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral916g00002 ATGGCAAGCAGCTCCCAAGTTATAACTTGCAAAGGAGCAATATGCTGGGGAATAGGAGAGGCAGTGAAGGTAGAAGAGATACAAGTAGATCCTCCAAAAGCCTCCGAAGTTCGTGTTAAGATGCTCTTTGCTAGTATCTGCCACACAGACTTCTTGAGAGCTCGAGGCCACCCATATGTGAGATCCTATTTACCCTCTTTTCCTCTTGCACTAGGCCATGAAGGTGTAGGTGTTGTGGAGAGCGTGGGGGAAGAAGTGAAAGATTTCAAAGAAGGAGATGTGGTGATTCCAATATACATTGGGGAATGTGGAGAATGTGAGAATTGTGTTTCAGAGGAATCAAACTTATGCCTGAGATATCCTTTAAGAGTGAGTGGGCTAATGCCTGATGACACATCAAGGATTTCTGTTAGAGGGGAAAAGGCTTACCATGTGTTTAGCTGCTCAACATGGTGTGAGTACATGGTTAGTGATGAAAAATATCTTATGAAAGTTGATCCAAGTATTGATTTGGCTCATGCTAGCTTCATCTCTTGTGGATTCTCCACTGGTTTTGGAGCTTCTTGGAAGACAGGCCAAGTTCAAAGTGGGTCATCTGTGGCTGTTTTCGGCCTTGGAGCTGTTGGATTAGGGGCTATAAGTGGAGCCAAGATGATGGGAGCGACAAAGATAATTGGGATCGACATAAATGAGAAGAAAAGAGAAAAAGGAGAAGCTTTTGGAATGACAGATTTCATAAATCCTAAGGATCATTCTGATAAGCCTTCTTCTCAACTGGTGAAGGACCTCACTGGTGGATTGGGTGTGGATTATGCCATTGAGTGCACTGGTGTTGCCTCTTTGCTCACTCAAGCCCTAGAATCTACTAAAGTGGGGAGAGGAAAGGCAATAGCAATTGGGGTGGGAAGTGAAGAATTTGTTCAAGTCAACTGGTTAGGTCTTCTTCTTGGGAGGACTTTGAAGGGTTCAATTTTTGGAGGCTTGAAACCCCAATCTGACCTTTCCATTTTAGCCGCCAAATGCAAGAACAAGGATTTCCCAATTGAGAAGCTTTTGACCCATGAAGTCCCGTTGACAGAGATAAACAAAGCTTTTGAGCTCTTGAAGCAGCCGGATTGTGTCAAAGTTATTATCAAGATGTGA 1143 0.4366 MASSSQVITCKGAICWGIGEAVKVEEIQVDPPKASEVRVKMLFASICHTDFLRARGHPYVRSYLPSFPLALGHEGVGVVESVGEEVKDFKEGDVVIPIYIGECGECENCVSEESNLCLRYPLRVSGLMPDDTSRISVRGEKAYHVFSCSTWCEYMVSDEKYLMKVDPSIDLAHASFISCGFSTGFGASWKTGQVQSGSSVAVFGLGAVGLGAISGAKMMGATKIIGIDINEKKREKGEAFGMTDFINPKDHSDKPSSQLVKDLTGGLGVDYAIECTGVASLLTQALESTKVGRGKAIAIGVGSEEFVQVNWLGLLLGRTLKGSIFGGLKPQSDLSILAAKCKNKDFPIEKLLTHEVPLTEINKAFELLKQPDCVKVIIKM 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral916g00002 380 SMART PKS_ER_names_mod 17 378 IPR020843 GO:0016491
Pral916g00002 380 PANTHER ALCOHOL DEHYDROGENASE 6 372 - -
Pral916g00002 380 Gene3D - 184 323 - -
Pral916g00002 380 SUPERFAMILY GroES-like 332 378 IPR011032 -
Pral916g00002 380 Pfam Zinc-binding dehydrogenase 207 327 IPR013149 -
Pral916g00002 380 Gene3D - 13 375 - -
Pral916g00002 380 FunFam S-(hydroxymethyl)glutathione dehydrogenase 184 323 - -
Pral916g00002 380 FunFam alcohol dehydrogenase 1-like isoform X1 18 183 - -
Pral916g00002 380 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 72 86 IPR002328 GO:0008270|GO:0016491
Pral916g00002 380 Pfam Alcohol dehydrogenase GroES-like domain 35 165 IPR013154 -
Pral916g00002 380 CDD liver_alcohol_DH_like 8 379 - -
Pral916g00002 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 342 IPR036291 -
Pral916g00002 380 SUPERFAMILY GroES-like 4 195 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral916g00002 Pral-Chr916 4954 7455 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral916g00002 35 372 Monolignol Biosynthesis Gene Families AT2G21730 26.608 1.63e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral916g00002 K00121 - gmx:100798341 515.768