Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral915g00001 ATGGGAGCATTGAACTTGAGACATTCTGCTATTAATGTGAATTTCGTTATTGAAGTATTGAACCTATACATCACTGATGCAAGGGTTATTCACCTTTCAGTAGGAAAGCGTTTCCGTGTCTTTGAAGTTAATTTTGTGGGAAATGATTTGTTCCTTAGCTCATATAAAACTGCATGGTTGATTTCTTTGGGTTCTAACAACAGTTTGCTGTTGCCTCTTGCCAGTAATGCCCTCATCCATGTGGAAATAAAAAATGAAGGAGAGGATGCTTTTAAGCCACAAATATATGGTGATGTGATCACTTTAGAACGCAGGATATCTGAATCCACAAGCTCCATCGTGTTAAAAGACTGTAGAGGAAAGAAGGTTGTCAGCCGGAAAGCAGAACTCCAGGAAATGGTTGAGCATTTTAATATTGATGTGGAGAATCCATGTGTAGTTATGAGTCAGGACAAAAGCAGGGAATTTTTACATTCAGGGAATGACAAGGATAAATTTAAGTTCTTTTACAAGGCTACACTTCTTCAGCAAGTCGATGATCTTTTGGAAAGCGTTTCTAAGGGATTAGAGCATTCATTTGGACTTCTTGGAGGATTAGAGGCTACAATAAGTCCTGTAGAGAAGGAGCTTAATGAGTTAAGAGTCAAAATTACAAACATGGAACAAGTTGAACAAATATCACTGCAGATTCAGCAGTTAAAGAAAAAACTTGCATGGTCATGGGTTTATGATGTGGACAAACAAATCCAGGAACAGTGTTCAAAGATTGATAAATTAAAGGATCGAATACCTAAGTGCCAAGCAAAGATTGATGAGCAAATGAATCTGGTCGAAGAATTGAGTGCATTCTTACATAAGAAGAAAGGTCATATCAAAAACTTGTTTGAAAAGACATCTGAAGTGAAGCAGAAGAAGCAAAATTTACAACAATCTATATCTATGGCTGCAAAAGAAGTACTTGAAAAAGAACAAGAGTGCACACGCGTAACTGTCAGTATTGAGAAGATGGTAAAGCGTGTTAGGACTCTTAAAGAACAGGTGCAGGATATTTACGAGAAGCATGCACAAAGTACTCAGGCTGAAGAATCTGAGATAGAGGAGATACTGAAGGTGCTCCAAAATGAGGTTGATGCTGCTGAATCAGCTCTGACAAGGTTGAGGGAAGAGGAAGCTATACTAGCTGATAATGTGCAGAGTCAAAGTAATGAAATAAGAAAGATTGCTGATGAGATTGAAGGACATGAAAGACGGTATCGTGATATCACCTTTTCCATCCGTGAGCTTAAACAACACCAAACCAATAAGGTTACAGCTTTTGGAGGAGATAGAGTGATGAACCTCCTGCGTATTATTGAGAGGAGTTATCGGAGGTTTAAGAGGCCTCCTATTGGTCCAATTGGTGCCCATCTGAATCTGGTTAATGGTGATAAGTGGGGTGTTGCTATTGAGCATGCAATTGGGAAGATGCTGAATGCTTTTGTAGTGACTGATCACAAGGATTCTCTTCTTTTGAGAGAATGTGCAAAGGAAGCAAACTATGGTCACCTCCAAATTTTTATTTATGATTTTTCAAGACCACGATTGTCTTTACCACAACACATGCTTCCCCAGACAACGCATCCTTCGATTCTATCTGTTTTATATTCGGCGAATGACACTGTGATTAATGTCTTAGTGGATCTGGGGAGCATTGAGCGTCAAATTCTTGTTCGGGATTATGATACTGGTAAAATGGTTGCATTTGACCAAAGGATTTCGAATCTGAAGGAGGTCTTCACCTCAGATGGATATAAAATGTTTTCTCGGGGCTCAGTGCAGACAGTTCTTCCCCCAAATAAGAGGCAGAGAACTAGCCGACTATGTAGTTCTTTCGATAATCAAATTAATGTTCTTGAAGCTGATGCTTCCCATGAACAAGAAGCAGCTAAGCACTTAAAGAGAAGTAAAAGGGAGGCTGAAGAAAAGCTTGAGGATCTTGATAGGGAGCTAAGACACGTGAAG 2001 0.3933 MGALNLRHSAINVNFVIEVLNLYITDARVIHLSVGKRFRVFEVNFVGNDLFLSSYKTAWLISLGSNNSLLLPLASNALIHVEIKNEGEDAFKPQIYGDVITLERRISESTSSIVLKDCRGKKVVSRKAELQEMVEHFNIDVENPCVVMSQDKSREFLHSGNDKDKFKFFYKATLLQQVDDLLESVSKGLEHSFGLLGGLEATISPVEKELNELRVKITNMEQVEQISLQIQQLKKKLAWSWVYDVDKQIQEQCSKIDKLKDRIPKCQAKIDEQMNLVEELSAFLHKKKGHIKNLFEKTSEVKQKKQNLQQSISMAAKEVLEKEQECTRVTVSIEKMVKRVRTLKEQVQDIYEKHAQSTQAEESEIEEILKVLQNEVDAAESALTRLREEEAILADNVQSQSNEIRKIADEIEGHERRYRDITFSIRELKQHQTNKVTAFGGDRVMNLLRIIERSYRRFKRPPIGPIGAHLNLVNGDKWGVAIEHAIGKMLNAFVVTDHKDSLLLRECAKEANYGHLQIFIYDFSRPRLSLPQHMLPQTTHPSILSVLYSANDTVINVLVDLGSIERQILVRDYDTGKMVAFDQRISNLKEVFTSDGYKMFSRGSVQTVLPPNKRQRTSRLCSSFDNQINVLEADASHEQEAAKHLKRSKREAEEKLEDLDRELRHVK 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral915g00001 667 Coils Coil 256 276 - -
Pral915g00001 667 Coils Coil 355 417 - -
Pral915g00001 667 Coils Coil 291 325 - -
Pral915g00001 667 Coils Coil 635 667 - -
Pral915g00001 667 MobiDBLite consensus disorder prediction 639 667 - -
Pral915g00001 667 SUPERFAMILY Smc hinge domain 445 600 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Pral915g00001 667 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 75 287 IPR027417 -
Pral915g00001 667 Coils Coil 333 353 - -
Pral915g00001 667 Gene3D - 52 263 IPR027417 -
Pral915g00001 667 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 75 666 - -
Pral915g00001 667 SUPERFAMILY Methyl-accepting chemotaxis protein (MCP) signaling domain 264 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral915g00001 Pral-Chr915 1418 14209 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral915g00001 74 667 Structural Maintenance of Chromosomes family AT5G07660 56.061 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral915g00001 K22804 - qsa:O6P43_029878 780.4