Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral908g00001 TTTTGGTTTCAGGTAGACTGGACGCCTGAACTGCATAACAAATTTGTTCATGCAGTGGAACAACTAGGTATTGATCAAGCCATACCTTCTCGAATTCTGGAGCTAATGAAAGTGGAGGGGTTGACAAGGCATAATGTGGCTAGCCATCTTCAGAAATATAGAATGCACAAGAGACATATCTTGCCTAAGGAAGAAGATCGAAGATGGCCAAATCAAAGAGATATAATGCAAAGGAGCTATTATGTGCCAAGGCCCATTATGGCCTATCCTCAATATCATTCTAACCACACCTTATCTCCAGCTCCTATGTATCCTATGTGGGGTCAACCAGGAAGTCAACCGGCTGGTGTACAGATGTGGGCCCACCTAACTATCACGTATGGCAGCCTTTTCCGGGGATGCACGCAGAAGCATGGGGTTGCCCTGTGTTGCCACCTTCTCAAAATCCTTGTTTTTACCACACTCAACATACGCCTGGATTGCACAGTGCTAATAACGTTGATTATAACTCTAGCATGCCTCCAAGTTCGTTGGAGCATCATCCGGCGGATGAAGTTGTTGACAAGGTTGTGA 573 0.4538 FWFQVDWTPELHNKFVHAVEQLGIDQAIPSRILELMKVEGLTRHNVASHLQKYRMHKRHILPKEEDRRWPNQRDIMQRSYYVPRPIMAYPQYHSNHTLSPAPMYPMWGQPGSQPAGVQMWAHLTITYGSLFRGCTQKHGVALCCHLLKILVFTTLNIRLDCTVLITLIITLACLQVRWSIIRRMKLLTRL 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral908g00001 190 NCBIfam myb-like DNA-binding domain, SHAQKYF class 5 57 IPR006447 GO:0003677
Pral908g00001 190 Pfam Myb-like DNA-binding domain 6 54 IPR001005 -
Pral908g00001 190 PANTHER TRANSCRIPTION ACTIVATOR GLK1 4 125 IPR044825 GO:0003700|GO:0045893
Pral908g00001 190 FunFam Two-component response regulator 3 61 - -
Pral908g00001 190 SUPERFAMILY Homeodomain-like 5 59 IPR009057 -
Pral908g00001 190 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 58 IPR017930 -
Pral908g00001 190 Gene3D - 4 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral908g00001 Pral-Chr908 268 2198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral908g00001 4 110 Response Regulator Gene Family AT4G18020 55.932 3.40e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral908g00001 Myb_DNA-binding 2.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral908g00001 - - gmx:100779121 219.55