Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral895g00003 ATGTGGATGGTGGGATATAATGAAGGGAGTGACTTCAACATGCCTGATCATGCATTCAATGGACGGAAGCTTAGGCCTTTAGTTCCAAGGCCACTGGCTTCACCTATAGCACATCATGCTACTGATTTCTTCACACAGTGTCACAATCTGGCATCAGTGGCAGATCAAGGCAAGAGAGAGTTCAACAATACTCCACCAGTTGTGGTGAGCACAAGGTGGAATCCTACCCCAGAGCAGCTGAGAGCTCTTGAAGAGTTGTATCGGAGAGGGACGAGAACGCCATCAGCAGAACAAATTCAGCATATCACAGCACAGCTTCGGAGGTTTGGGAAAATTGAAGGGAAGAATGTGTTCTATTGGTTTCAGAATCACAAAGCCAGAGAGAGGCAGAAACGACGCCGTCAAGTGGAATCAGCTGCAGTAGAGGGACACCCCTACGATCTTGATGCTCTTGAAAAGAAAGACTTAGGCGCGAGTAGGACAGCGTTTGAAGTTGAACAGACTAGCAGGAACAACTGGGCACCCTCTACAAACTGCAGTGTTCCTCTTGCAGAGGAATCTGTCTCAATACAAAGGGCAGCAAAAGCAGCTGCAGCAGCGGCAGCAGTTGCAGAGAGTAGAACAGATGGATGGGTTCAATTCCATGAAGGAGAATTACAACAAAGAAGAAACTTTATGGAAAGGAATGCCACGTGGCAGATGTTACAGCCATCTTCTTGTCCTCCCCCTACAGCTGCTGCTACCACTGCTCCCTCTACAACTAGCATTATTGCTACTAATGCAGCCACAGTAATGGACCCAAAGCTAGTAAAGAACCATTGTAATATCAGCTTTTTCATGTCTCCTCACACTGAAAACGGTGTTATCCACCCAAACAGTAATGGGATTCTCAGGGAAGATGATCATAACAACCATGTGGAATCCCAAACCCTTCAACTTTTCCCACTAAGGAGTGGAGGAGATGGCTGCAATAACATTAACCAGAAAGAGACAGAGATATCAGTGTCCTCCGCCATGGATTCCAACTTGACTCCAAGCCAGTTCTTTGAGTTCCTTCCATTGAAGAACTAA 1071 0.4641 MWMVGYNEGSDFNMPDHAFNGRKLRPLVPRPLASPIAHHATDFFTQCHNLASVADQGKREFNNTPPVVVSTRWNPTPEQLRALEELYRRGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQVESAAVEGHPYDLDALEKKDLGASRTAFEVEQTSRNNWAPSTNCSVPLAEESVSIQRAAKAAAAAAAVAESRTDGWVQFHEGELQQRRNFMERNATWQMLQPSSCPPPTAAATTAPSTTSIIATNAATVMDPKLVKNHCNISFFMSPHTENGVIHPNSNGILREDDHNNHVESQTLQLFPLRSGGDGCNNINQKETEISVSSAMDSNLTPSQFFEFLPLKN 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral895g00003 356 Gene3D - 69 131 - -
Pral895g00003 356 CDD homeodomain 71 132 IPR001356 GO:0003677
Pral895g00003 356 SUPERFAMILY Homeodomain-like 71 136 IPR009057 -
Pral895g00003 356 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 55 351 IPR044555 GO:0003700|GO:0099402
Pral895g00003 356 FunFam WUSCHEL-related homeobox 4 70 137 - -
Pral895g00003 356 Pfam Homeodomain 71 130 IPR001356 GO:0003677
Pral895g00003 356 SMART HOX_1 68 135 IPR001356 GO:0003677
Pral895g00003 356 ProSiteProfiles 'Homeobox' domain profile. 76 131 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral895g00003 Pral-Chr895 22340 24395 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral895g00003 1 356 Wox Gene Family AT3G18010 38.000 2.47e-60 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pral895g00003 Homeodomain 1.5e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral895g00003 - - gmx:100785161 444.121