Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral892g00007 ATGGGCTGCTTTTCCTGTTGCCTTACCCCGTCAGAGAAAGTCGTCGATGCAGATGGTCCAACAGAAGTTTCAAAACGCAGGACAGAACTGAAATCCTATACGTTGAAATCAATTGTTTCAAATATTTCACTCAAGACAGGTAGCAGCAGGCAGAGAAGGATAACTGCAGAGATACAAAAACACGGAACTGTACAAAATGAAGCTACAGTTTTCACATACAAAGAACTCGGTGATGCAACTGACGGTTTCAGCGATGAACACAGAATAGGCGAGGGGGGATTCGGGGTGGTCTACAAAGGACGCATAGAAAGCATTGATCAAGTTGTGGCTGTGAAGCAGCTGGACAGACAAGGAAGGCAAGGAACTAGAGAATTTATTTCAGAGGTTTTGATGTTAAGCTTGTTGAAGCATCCCAACCTTGTCAATTTGATAGGTTATTGTGTTGAAGACGACCACAGGATTTTGACCTACGAGTACATGCCCAATGGGAGTCTAGAAGATCACCTTCTAGACTTGGCTCCAAATAAGGCGCCTTTATCTTGGGACATGAGGTTGAAAATAGCTGAGGGAGCTGCAAGAGGGCTTGAGTATCTACATGAAATTGCTGAGCCAAAAGTAATATACCGCGATTTTAAAGCATCAAATATATTGTTAGATAGCGACTTCAATCCCAGGCTTTCTGATTTTGGTATGGCCAAGATGGGTCCAACACAAGGCCAACTTTATATCACCACGAGGGTCATGGGAACCTATGGCTATTGTGCACCAGAGTATGCTGCCACCGGGCAGCTGACGAGCAAGTCTGATGTTTATAGCTTTGGGGTTGTGCTTTTGGAGATAATCTCTGGCAGACGAGTTATTGACGTTACAAAAGCAGCAGACGAGCAGAACCTGATTCAATGGGCACAACCACTGTTTAAGGACAGAAGCAAGTTTACTCTAATGGCTGACCCCTTGCTTGACGGCAACTACCCTGAGAAGAGTCTATTTCAAGCACTTGCAGTGGCAGCAATGTGTTTGCAAGAAGAAGCTGAGGCAAGACCTTCAATGGGTGAGGTTGTGGAAGCTCTTGAACTTCTATCAAAGCCGAAAGATACAGAATAG 1104 0.4466 MGCFSCCLTPSEKVVDADGPTEVSKRRTELKSYTLKSIVSNISLKTGSSRQRRITAEIQKHGTVQNEATVFTYKELGDATDGFSDEHRIGEGGFGVVYKGRIESIDQVVAVKQLDRQGRQGTREFISEVLMLSLLKHPNLVNLIGYCVEDDHRILTYEYMPNGSLEDHLLDLAPNKAPLSWDMRLKIAEGAARGLEYLHEIAEPKVIYRDFKASNILLDSDFNPRLSDFGMAKMGPTQGQLYITTRVMGTYGYCAPEYAATGQLTSKSDVYSFGVVLLEIISGRRVIDVTKAADEQNLIQWAQPLFKDRSKFTLMADPLLDGNYPEKSLFQALAVAAMCLQEEAEARPSMGEVVEALELLSKPKDTE 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral892g00007 367 Gene3D Phosphorylase Kinase; domain 1 43 159 - -
Pral892g00007 367 Pfam Protein kinase domain 84 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral892g00007 367 SUPERFAMILY Protein kinase-like (PK-like) 63 360 IPR011009 -
Pral892g00007 367 FunFam serine/threonine-protein kinase PBS1-like 49 159 - -
Pral892g00007 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Pral892g00007 367 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
Pral892g00007 367 ProSiteProfiles Protein kinase domain profile. 83 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral892g00007 367 FunFam Serine/threonine-protein kinase PBS1 160 367 - -
Pral892g00007 367 PIRSF ILK 28 366 - -
Pral892g00007 367 PANTHER OS07G0668900 PROTEIN 29 364 - -
Pral892g00007 367 Gene3D Transferase(Phosphotransferase) domain 1 160 367 - -
Pral892g00007 367 CDD STKc_IRAK 89 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral892g00007 Pral-Chr892 48241 50174 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral892g00007 1 365 Glycoside Hydrolase AT3G07070 56.986 7.27e-144 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pral892g00007 Pkinase 9.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral892g00007 - - qsa:O6P43_031228 488.034