Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral891g00002 ATGCCAAGCTACGCTCCACATTTGCCTTCTAGTTCCATGGATATAGAGGGATCTGCCGTTCATCATTCTCAAATATCTGAATTTGGAGCCCTTGAGCAATCACTTGGATTTCGTGTAGATGATGCTATCAATCTTAGCAGAAATCCAATATTCAGTCAAATCAAATCAAATAGCCAGGTTCTTGGTGGCGATGTTCAACTTGGTGCATTAAGTAAGATACCATCACAAGCATCCTCAGATATGAGACTCTCTGCTGCAATTGTGGCATCTCAGACACTGCCATTACAAAGAGACACACAACCTAATCTGGCTTCTATATCTGGTGGCCCTCGCGAGTACTGGGGGGAGTCAAACATTGCAGATGCAAGCCCTAGGACTGATACTTCAACAGATGACACAAACTCTAAAAATCAAAGGCCTGAAAGGGGCCGCTCATCTATTGCAGTATCTGATTCCAACGATAGATCAGATCAAAAGACACTGCGACGGCTGGCTCAAAATCGTGAGGCTGCCAGAAAAAGCAGACTAAAGAAAAAGGCATATGTACAACAATTGGAAAGTAGCAGGCTGAAACTGACCCAACTTGAGCAGGAGCTTCAGCGAGCCCGCCAACAGGGCATTTTCATTTCAAGTGCAGGAGACCAATCCCATTCATTGAGTGCAAATGGTGCCATGGCATTTGATATAGAGTATGCACGATGGTTAGAAGAGCATAATAAACAAATCAATGAGCTAAAGGCTGCAGTCAATTCCCATGCTGGAGATATTGAGCTGCGTACAATTGTTGACAACATCATGACTCACTTTGATGAGGTTTTCAGACTGAAATGTGCTGCAGCAAAAGCTGATGTTTTCCACATCCTGTCTGGATTGTGGAAGACTCCAGCAGAGAGGTGTTTCATGTGGATAGGAGGCTTCCGCTCTTCTGACCTTCTGAAGCTTCTTGTAAGTCAGTTGGAGTCCTTAACTGAGCAACAGATGATGGGCATCTACAACTTGCAGCAGTCTTCCCAACAGGCTGAAGACGCTCTGTCCCAAGGAATGGATGCATTGCAGCAATCACTGGCCGAGACCCTTGCTGATAATTCACCCAACCCTTCAGGGTCATCCACGAACGTGGCACATTATATGGGCCAAATGGCCAAGGCCATGGGGAAGCTTGGCACACTTGAGAGGTTCCTTCGCCAGGCTGATAATCTACGACAGCAAACATTACAACAAATGCTGCGGATATTAACCATCCGGCAATCGGCTCGAGCTCTACTCGCGATAGGTGATTATTTCTGTCGGCTAAGAGCCTTGAGCTCACTGTGGCTTGCCCGACCACGGGAATGA 1335 0.4637 MPSYAPHLPSSSMDIEGSAVHHSQISEFGALEQSLGFRVDDAINLSRNPIFSQIKSNSQVLGGDVQLGALSKIPSQASSDMRLSAAIVASQTLPLQRDTQPNLASISGGPREYWGESNIADASPRTDTSTDDTNSKNQRPERGRSSIAVSDSNDRSDQKTLRRLAQNREAARKSRLKKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSAGDQSHSLSANGAMAFDIEYARWLEEHNKQINELKAAVNSHAGDIELRTIVDNIMTHFDEVFRLKCAAAKADVFHILSGLWKTPAERCFMWIGGFRSSDLLKLLVSQLESLTEQQMMGIYNLQQSSQQAEDALSQGMDALQQSLAETLADNSPNPSGSSTNVAHYMGQMAKAMGKLGTLERFLRQADNLRQQTLQQMLRILTIRQSARALLAIGDYFCRLRALSSLWLARPRE 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral891g00002 444 CDD bZIP_HBP1b-like 159 211 - -
Pral891g00002 444 PANTHER TRANSCRIPTION FACTOR TGA9 114 444 - -
Pral891g00002 444 SUPERFAMILY Leucine zipper domain 159 202 IPR046347 GO:0003700|GO:0006355
Pral891g00002 444 Gene3D - 158 210 - -
Pral891g00002 444 Coils Coil 178 205 - -
Pral891g00002 444 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 157 201 IPR004827 GO:0003700|GO:0006355
Pral891g00002 444 Coils Coil 235 255 - -
Pral891g00002 444 Pfam Basic region leucine zipper 156 201 IPR004827 GO:0003700|GO:0006355
Pral891g00002 444 MobiDBLite consensus disorder prediction 140 154 - -
Pral891g00002 444 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 162 177 IPR004827 GO:0003700|GO:0006355
Pral891g00002 444 FunFam BZIP family transcription factor 158 207 - -
Pral891g00002 444 Pfam Seed dormancy control 241 317 IPR025422 GO:0006351|GO:0043565
Pral891g00002 444 MobiDBLite consensus disorder prediction 99 159 - -
Pral891g00002 444 SMART brlzneu 155 218 IPR004827 GO:0003700|GO:0006355
Pral891g00002 444 ProSiteProfiles DOG1 domain profile. 224 441 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral891g00002 Pral-Chr891 17665 23076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral891g00002 119 444 bZIP Transcription Factor Family AT3G12250 72.508 2.73e-167 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral891g00002 DOG1 4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral891g00002 K14431 - gmx:778136 649.432