Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral889g00001 ATGTTTGGGTTTAGGAAAGCAGCCCCTCCAAAGGAGGAGAACCCCGCAGGCTCAGTATCTTCCGCTCCTCCTGAGACAACCGTTAAACCAGAAAGAAGAACAACCTCAGAACCTGTCATACCAGCACCAAAATCCAAAGGAAACTACTTTGATGACGACGATGACGATGATGATTGGGGAAGAGGAAGAAAGACTTCTGCCACTTCATCATCTTCCTCGGCTGCTGCTAAAAACAGGTACAAGAACAATTTCCAGGACTCTGGGGGCCTAGAGAACCAGAGTGTCCAAGAGCTGGAAAACTATGCTGTATACAAGTCTGAAGAGACAACAAAGGATGTTAATAATTGTCTGAGGATAGCTGAGGACATCAAAGGGGATGCTACAAGGACCCTTGACATGCTGCACCAACAGGGTGAGCAAATCCACAGGACCCACAATATGATTGTTGAGACCGAGAAGGATTTAAGTCGGGGTGAAAAACTGCTGAACAATCTTGGAGGCATGTTCTCTATGCCCTGGAAGCCAAAGAAGACCAGGGAGATTAAAGGCCCCATAATTACACCAGACAAGCCATCCAAGACAAATGATAAGCAGCATAAGGAAGAGAGGGAAAAATTAGGCCTAAATGATGGTAAAGGAAAGGCAGTTTCTAAAACACCTCCTTCTGAGCCAACAAATGCATATCAGAAAATTGAGATGGAGAAGAACAAACAAGATGGCGCACTTGATGATCTGAGTAATATCTTGGGCGATTTAAAGGGTATAGCAGTTGACATGGGAACTGAACTTGACAGGCAAAACAAAGCACTTGATCATCTTAGTGATGATGTGGATGAACTGAATTCTCGAGTTAAGGGTGCCAACCAGCGTGCTCGTAAACTGCTAGCAA 889 0.4488 MFGFRKAAPPKEENPAGSVSSAPPETTVKPERRTTSEPVIPAPKSKGNYFDDDDDDDDWGRGRKTSATSSSSSAAAKNRYKNNFQDSGGLENQSVQELENYAVYKSEETTKDVNNCLRIAEDIKGDATRTLDMLHQQGEQIHRTHNMIVETEKDLSRGEKLLNNLGGMFSMPWKPKKTREIKGPIITPDKPSKTNDKQHKEEREKLGLNDGKGKAVSKTPPSEPTNAYQKIEMEKNKQDGALDDLSNILGDLKGIAVDMGTELDRQNKALDHLSDDVDELNSRVKGANQRARKLLA 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral889g00001 296 CDD SNARE_Qc 235 293 - -
Pral889g00001 296 Gene3D - 215 296 - -
Pral889g00001 296 MobiDBLite consensus disorder prediction 181 226 - -
Pral889g00001 296 MobiDBLite consensus disorder prediction 64 92 - -
Pral889g00001 296 Coils Coil 263 296 - -
Pral889g00001 296 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 232 294 IPR000727 -
Pral889g00001 296 FunFam SNAP25 homologous protein SNAP33 89 166 - -
Pral889g00001 296 SMART tSNARE_6 227 294 IPR000727 -
Pral889g00001 296 SMART tSNARE_6 98 165 IPR000727 -
Pral889g00001 296 CDD SNARE_SNAP25N_23N_29N_SEC9N 100 164 IPR044766 GO:0005484|GO:0031201
Pral889g00001 296 FunFam SNAP25 homologous protein SNAP33 229 296 - -
Pral889g00001 296 SUPERFAMILY SNARE fusion complex 226 295 - -
Pral889g00001 296 SUPERFAMILY SNARE fusion complex 93 164 - -
Pral889g00001 296 MobiDBLite consensus disorder prediction 1 92 - -
Pral889g00001 296 MobiDBLite consensus disorder prediction 181 211 - -
Pral889g00001 296 Gene3D - 89 167 - -
Pral889g00001 296 PANTHER SYNAPTOSOMAL ASSOCIATED PROTEIN 65 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral889g00001 Pral-Chr889 28428 31129 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral889g00001 223 292 SNARE and Associated Proteins AT3G09740 40.000 9.74e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral889g00001 K18211 - gmx:100806781 405.601