Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral884g00001 ATGAGTTCGCAAAAGTTCAACAATGGGGGTGACGGTTTTAGTGGGGACGTCAGTCTTTTGCCACCAGCTCCCTCTTACGCCTCCCCTCTTATCGTTCGAGCTCCTCAACTTTCACTGTCAAACACTTTTGGCCGGACTGGCGGCGAGATTGGCTTTCAGGTCCTGAGCCCCTCATTTCCGCCCCAGGTGAAGAGGGGAACAATGAGAGGCAACGGTGAAGCTGATGGACCTTCAGAGGCCCAGAACAAGGGCTTGCCTTTCAAACTTGGCGAGGAGGACATTGAAGCCAAGAGCTCTTCTGGCTCCAGGAATGGACACACAAAGCTCTGCGCTAGAGGCCACTGGAGGCCAGCTGAAGATGCCAGGCTTAAAGAGCTCGTAGTTCAGTACGGTCCTCAAAATTGGAACTTGATCGCCGACCATCTCGAAGGAAGATCAGGTAAAAGTTGCAGACTGAGGTGGTTCAATCAGCTCGATCCCAGAATTAACAGGAGGGCGTTCTCTGAGGAAGAAGAGGCGAGGTTGTTGTCTGCTCATAGAATGTACGGGAACAAATGGGCTATGATTGCCAAACTGTTTCCTGGGAGGACAGATAATGCGGTGAAGAACCACTGGCACGTGATAATGGCCAGGAAGCACAGAGAGCAATCAATTGGCTGTAGGAGGAGGAGGTCTTGTTCGGAAATCATCCGCCCAAAGGCTTTAAATTTGACCCTCTCAAATAAGGCAGTGAGCGAATCCACCAACTCCAGCAACCTCATCGATGAATCTGCCTCATCCTCCACTGATCTCTCCCTCAGTGCCACATTGTTCCCAAACCCGAGCCCCCAGGGCCACGGATCGCTGATGGGTCTATCCAATGAGATGAAGTCGAGAACTGGGGACGTGGGATTCGACAGGATGTTTGTCGGTAGGAACGGATGTAATGAGGGAAGAGCACAAATGGGGAAGCTGATGGGAGTAGTGGACCAATCAAATTCAGACTCAAACTCAGAAATCTCAGTATCTGAGTCAGTGGCCACCAACAGGACGAGCCTCTCAATTTGTGGGGAAAGTGAGAACGGGGGCGATAACATGAACATGCCATTCATTGATTTCCTCGGGGTAGGAGCTGTATGA 1119 0.513 MSSQKFNNGGDGFSGDVSLLPPAPSYASPLIVRAPQLSLSNTFGRTGGEIGFQVLSPSFPPQVKRGTMRGNGEADGPSEAQNKGLPFKLGEEDIEAKSSSGSRNGHTKLCARGHWRPAEDARLKELVVQYGPQNWNLIADHLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEARLLSAHRMYGNKWAMIAKLFPGRTDNAVKNHWHVIMARKHREQSIGCRRRRSCSEIIRPKALNLTLSNKAVSESTNSSNLIDESASSSTDLSLSATLFPNPSPQGHGSLMGLSNEMKSRTGDVGFDRMFVGRNGCNEGRAQMGKLMGVVDQSNSDSNSEISVSESVATNRTSLSICGESENGGDNMNMPFIDFLGVGAV 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral884g00001 372 FunFam MYB transcription factor 112 163 - -
Pral884g00001 372 Gene3D - 112 163 - -
Pral884g00001 372 CDD SANT 115 156 IPR001005 -
Pral884g00001 372 PANTHER MYB PROTEIN-RELATED 112 261 - -
Pral884g00001 372 ProSiteProfiles Myb-like domain profile. 159 209 IPR001005 -
Pral884g00001 372 SMART sant 163 211 IPR001005 -
Pral884g00001 372 SMART sant 111 160 IPR001005 -
Pral884g00001 372 CDD SANT 166 206 IPR001005 -
Pral884g00001 372 ProSiteProfiles Myb-like domain profile. 112 158 IPR001005 -
Pral884g00001 372 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 159 213 IPR017930 -
Pral884g00001 372 Gene3D - 165 228 - -
Pral884g00001 372 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 112 158 IPR017930 -
Pral884g00001 372 MobiDBLite consensus disorder prediction 54 86 - -
Pral884g00001 372 SUPERFAMILY Homeodomain-like 112 205 IPR009057 -
Pral884g00001 372 Pfam Myb-like DNA-binding domain 164 207 IPR001005 -
Pral884g00001 372 Pfam Myb-like DNA-binding domain 112 158 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral884g00001 Pral-Chr884 5974 7549 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral884g00001 111 296 MYB Transcription Factor Family AT1G69560 58.201 8.91e-68 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral884g00001 Myb_DNA-binding 2.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral884g00001 K09422 - gmx:100776882 358.221