Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral875g00055 ATGAAAATTGAATATTTCGAACAGATGTCTTCGCTTTTGGGCTCAATATTGTTGTGGTGGCCTCCAACTCGGTTTCCTGTTTGGAATGATGTTCAACTGATAAATACTTTGTCAGATATGTATGCAAGGACAGATATTTCTACCAAACTTGTAATTTTGAAGCTGTACACATCTTTAGCTTTATGTGGATCTGTGGCCAAAAAACTTATAGAGAATGGAGAAGTCTTTCTACAAATGGTTGTGCAATCCATGGGAAAATCATACCCCGATGCTGTGAGAATAGAAGGCTTTAGGCTTTCTCAATGTCTATTGAGGTCCCAAGAGAATTGTTTGAAAGTGATGGATACATGTGGTGAAGCTCTTGTTGATGCCATAATTTGTGGGATGGAAGAAACAGGGATGCATTCTAGAAAATTTGTAAACAAGAATAGTTCTATATTAGTGGAAGCATGCCGATTGGCTTTAGTAACTCGTTGGGCAGGTGATCATCATATCAGTTTTTGGAAGCAAAGAATTGATAAAGTCCTCCTTAATCTTTTGATAGAAAATATTCATGATTTATCAGAGGAACATGTTTCTTCATTGGACAAACAAATATCCATTGCAAAGGAGGGTTTAAAAACCAATCATCAGCTTTGTGTGAGGGGTTATGTGTGGGACATTCTTGGTTGGCTCACAATACATTCTGGAGAAAATTTCAACCCATGTATCCATGGAAGTGGGCTCTACATCAACCTGATTATCATATGTGCATGCTTAACTTTTGAGGATGTGATTAAGAAATGGTGCCGAATATATCAAAAGGATGCTGATGATAGTTTTCAGAGTGAACCAGCATCAAGGGCTGTTCTAATGATGATTTATTCTCCCTGTAATTACATTTCATCCCAAGCCAGGCTCATATTTTCTAAGACATACTCTTCAGATCATTTCACTAGCTTAGCACATACGCTAGAATATGCATCATCACTTGAAAGTTATGGGTCGTTTGATAAGCTCCAACTTATCATCAACTTGATTGGATTGATCTCTTTTTTAAGTTTACCTCATCATCATACACTTGAAGGCAAATACATAAGGACAGTTGCTTTCATAGTAAAACGATGCTTAGGCAATGATATTGATGTATCAAGGCTCAGCTTAGCTCCTCATTTGCATACTACATTGTATGAAAAATCCTGTTGTTGGATGGACGCAGAAGATTGGGAAGGTTCCAATATTCTCTTGTTTTATGGTTTGTGGGGCTTAGCTGAAATGGTTCACCAATCTGCCCCTTTACAAAATAATTCTCGCATATCTATTGTTGATATAGAATATTTTGAAGCTCAGTTAGTTCGCAAACTCCTTGAGATTTGCAGTAATGCCTCTTTTACTCATGGTTTAAGATGGTATGCAGCTTATATTCTTAGTCATTTTGGATTTTATGGTTTCCCAAATGAACTAGGCAAAAGGGTTGGGAGATGCCTTAATGAGAAAGAATATGCAGATATTCAACTCTTTTTGGCCAATGGCAATACTTTGAGTGTTCATGGTGTTATTCTTGCTGTTCGATGTTCATCATTGCTCCCTCCCGAAGTTAGTCTTGTTAAGGAAAAAAGAATCGATGGCCAATCCATTAGGGAAGTTCGTTTGTCTTCTCATGTTGATTATGAAGCATTAGTGAAGTTGTTGGAGTATGTATATGTGGGATACTTCCATGCCGATGAAGAAATTGTAAAGAAGTTGAAAATTCTTGCTAAGCGCTGCGATCTGCAGCCTCTCCTGCAAATGCTTCATAGACAAAGTCCAAAATGGGGAACATCATTCCCCAGCTTTGATCTCACTCCATCTCTTGTTTCAGCTGGAAGTTGTTTTTGGGATGTTATATTGGAATCTAAACAAGAAAAACTTGAAGGATGGACATGCTGTACATGCTCTCATTCAGTTCCACACTTGCATGTTCATAAAGTTATTTTACAATCTGGCTGTGACTACTTGCAAGGATTGTTTCGTTCAGGAATGAAAGAGAGTAATTCACCAATCATAAAGGTTCCTACTAGTTGGGAAGCAGCGAATAAGCTTGTGCACTGGTTCTATTCCAGTGAACTGCCAAATCCTCCATCCGGATGTTTGTGGGATAATATGGATGATGAGCAAAAACTATGCAGCTTACAGTCATACGTGGAGCTTTATTGGCTTTCAGAATTCTGGATTTTAGAAGATGTTCAAGAAGCTTGCTGGAACGTGATTGTATCTTATCTTGATAATTCAAAGCAGTTGTCCCTTAAAATGCTTAAAATGGCCGGCGACCTCTCTCTATGGAAATTAGCTGATGTAGCAGCAATTCACTTGGCTCCTTCATATAGTCAATTACGAGATTCTTGTGAACTTGAAGATTTGGATGATGCTCTTGTTCATTTAATTTGTTCTGCTTCTACTCAACTTAGCCAAAATGGATGA 2439 0.3797 MKIEYFEQMSSLLGSILLWWPPTRFPVWNDVQLINTLSDMYARTDISTKLVILKLYTSLALCGSVAKKLIENGEVFLQMVVQSMGKSYPDAVRIEGFRLSQCLLRSQENCLKVMDTCGEALVDAIICGMEETGMHSRKFVNKNSSILVEACRLALVTRWAGDHHISFWKQRIDKVLLNLLIENIHDLSEEHVSSLDKQISIAKEGLKTNHQLCVRGYVWDILGWLTIHSGENFNPCIHGSGLYINLIIICACLTFEDVIKKWCRIYQKDADDSFQSEPASRAVLMMIYSPCNYISSQARLIFSKTYSSDHFTSLAHTLEYASSLESYGSFDKLQLIINLIGLISFLSLPHHHTLEGKYIRTVAFIVKRCLGNDIDVSRLSLAPHLHTTLYEKSCCWMDAEDWEGSNILLFYGLWGLAEMVHQSAPLQNNSRISIVDIEYFEAQLVRKLLEICSNASFTHGLRWYAAYILSHFGFYGFPNELGKRVGRCLNEKEYADIQLFLANGNTLSVHGVILAVRCSSLLPPEVSLVKEKRIDGQSIREVRLSSHVDYEALVKLLEYVYVGYFHADEEIVKKLKILAKRCDLQPLLQMLHRQSPKWGTSFPSFDLTPSLVSAGSCFWDVILESKQEKLEGWTCCTCSHSVPHLHVHKVILQSGCDYLQGLFRSGMKESNSPIIKVPTSWEAANKLVHWFYSSELPNPPSGCLWDNMDDEQKLCSLQSYVELYWLSEFWILEDVQEACWNVIVSYLDNSKQLSLKMLKMAGDLSLWKLADVAAIHLAPSYSQLRDSCELEDLDDALVHLICSASTQLSQNG 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral875g00055 812 ProSiteProfiles BTB domain profile. 495 569 IPR000210 GO:0005515
Pral875g00055 812 SMART BTB_4 495 599 IPR000210 GO:0005515
Pral875g00055 812 SMART BTB_4 634 747 IPR000210 GO:0005515
Pral875g00055 812 Gene3D Potassium Channel Kv1.1; Chain A 477 594 IPR011333 -
Pral875g00055 812 SUPERFAMILY POZ domain 474 591 IPR011333 -
Pral875g00055 812 ProSiteProfiles BTB domain profile. 619 700 IPR000210 GO:0005515
Pral875g00055 812 Gene3D Potassium Channel Kv1.1; Chain A 614 810 IPR011333 -
Pral875g00055 812 Pfam BTB/POZ domain 489 591 IPR000210 GO:0005515
Pral875g00055 812 Pfam BTB/POZ domain 644 704 IPR000210 GO:0005515
Pral875g00055 812 SUPERFAMILY POZ domain 644 744 IPR011333 -
Pral875g00055 812 CDD BTB_POZ_ZBTB_KLHL-like 644 696 - -
Pral875g00055 812 PANTHER OS06G0674800 PROTEIN 2 811 IPR044953 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral875g00055 Pral-Chr875 344881 348551 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pral875g00055 BTB 1.8e-05 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral875g00055 - - mtr:25487018 1090.49