Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral875g00053 ATGTATGGCAGCAAATGTAGCAGTAAAGCTAAGGTTGCAATACCCTGTTCTACTTCTTTGAATTTGGTAATTTCAAATTTAAATGCCAGTAGTGCAAAGGCAGTTTGGGAGGTACTGAAACAAACAGAATGTGTAATTCATATTGTGGGCAATATACGCAAATTTGTTGGAGTTGAAATTCCAATGAAAATTGAATATTTCGAACAGATGTCTTCGCTTTTGGGCTCAATATTGTTGTGGTGGCCTCCAACTCGGTTTCCTGTTTGGAATGATGTTCAACTGATAAATACTTTGTCAGATATGTATGCAAGGACAGATATTTCTACCAAACTTGTAATTTTGAAGCTGTACACATCTTTAGCTTTATGTGGATCTGTGGCCAAAAAACTTATAGAGAATGGAGAAGTCTTTCTACAAATGGTTGTGCAATCCATGGGAAAATCATACCCCGATGCTGTGAGAATAGAAGGCTTTAGGCTTTCTCAATGTCTATTGAGGTCCCAAGAGAATTGTTTGAAAGTGATGGATACATGTGGTGAAGCTCTTGTTGATGCCATAATTTGTGGGATGGAAGAAACAGGGATGCATTCTAGAAAATTTGTAAACAAGAATAGTTCTATATTAGTGGAAGCATGCCGATTGGCTTTAGTAACTCGTTGGGCAGGTGATCATCATATCAGTTTTTGGAAGCAAAGAATTGATAAAGTCCTCCTTAATCTTTTGATAGAAAATATTCATGATTTATCAGAGGAACATGTTTCTTCATTGGACAAACAAATATCCATTGCAAAGGAGGGTTTAAAAACCAATCATCAGCTTTGTGTGAGGGGTTATGTGTGGGACATTCTTGGTTGGCTCACAATACATTCTGGAGAAAATTTCAACCCATGTATCCATGGAAGTGGGCTCTACATCAACCTGATTATCATATGTGCATGCTTAACTTTTGAGGATGTGATTAAGAAATGGTGCCGAATATATCAAAAGGATGCTGATGATAGTTTTCAGAGTGAACCAGCATCAAGGGCTGTTCTAATGATGATTTATTCTCCCTGTAATTACATTTCATCCCAAGCCAGGCTCATATTTTCTAAGACATACTCTTCAGATCATTTCACTAGCTTAGCACATACGCTAGAATATGCATCATCACTTGAAAGTTATGGGTCGTTTGATAAGCTCCAACTTATCATCAACTTGATTGGATTGATCTCTTTTTTAAGTTTACCTCATCATCATACACTTGAAGGCAAATACATAAGGACAGTTGCTTTCATAGTAAAACGATGCTTAGGCAATGATATTGATGTATCAAGGCTCAGCTTAGCTCCTCATTTGCATACTACATTGTATGAAAAATCCTGTTGTTGGATGGACGCAGAAGATTGGGAAGGTTCCAATATTCTCTTGTTTTATGGTTTGTGGGGCTTAGCTGAAATGGTTCACCAATCTGCCCCTTTACAAAATAATTCTCGCATATCTATTGTTGATATAGAATATTTTGAAGCTCAGTTAGTTCGCAAACTCCTTGAGATTTGCAGTAATGCCTCTTTTACTCATGGTTTAAGATGGTATGCAGCTTATATTCTTAGTCATTTTGGATTTTATGGTTTCCCAAATGAACTAGGCAAAAGGGTTGGGAGATGCCTTAATGAGAAAGAATATGCAGATATTCAACTCTTTTTGGCCAATGGCAATACTTTGAGTGTTCATGGTGTTATTCTTGCTGTTCGATGTTCATCATTGCTCCCTCCCGAAGTTAGTCTTGTTAAGGAAAAAAGAATCGATGGCCAATCCATTAGGGAAGTTCGTTTGTCTTCTCATGTTGATTATGAAGCATTAGTGAAGTTGTTGGAGTATGTATATGTGGGATACTTCCATGCCGATGAAGAAATTGTAAAGAAGTTGAAAATTCTTGCTAAGCGCTGCGATCTGCAGCCTCTCCTGCAAATGCTTCATAGACAAAGTCCAAAATGGGGAACATCATTCCCCAGCTTTGATCTCACTCCATCTCTTGTTTCAGCTGGAAGTTGTTTTTGGGATGTTATATTGGAATCTAAACAAGAAAAACTTGAAGGATGGACATGCTGTACATGCTCTCATTCAGTTCCACACTTGCATGTTCATAAAGTTATTTTACAATCTGGCTGTGACTACTTGCAAGGATTGTTTCGTTCAGGAATGAAAGAGAGTAATTCACCAATCATAAAGGTTCCTACTAGTTGGGAAGCAGCGAATAAGCTTGTGCACTGGTTCTATTCCAGTGAACTGCCAAATCCTCCATCCGGATGTTTGTGGGATAATATGGATGATGAGCAAAAACTATGCAGCTTACAGTCATACGTGGAGCTTTATTGGCTTTCAGAATTCTGGATTTTAGAAGATGTTCAAGAAGCTTGCTGGAACGTGATTGTATCTTATCTTGATAATTCAAAGCAGTTGTCCCTTAAAATGCTTAAAATGGCCGGCGACCTCTCTCTATGGAAATTAGCTGATGTAGCAGCAATTCACTTGGCTCCTTCATATAGTCAATTACGAGATTCTTGTGAACTTGAAGATTTGGATGATGCTCTTGTTCATTTAATTTGTTCTGCTTCTACTCAACTTAGCCAAAATGGATGA 2622 0.3783 MYGSKCSSKAKVAIPCSTSLNLVISNLNASSAKAVWEVLKQTECVIHIVGNIRKFVGVEIPMKIEYFEQMSSLLGSILLWWPPTRFPVWNDVQLINTLSDMYARTDISTKLVILKLYTSLALCGSVAKKLIENGEVFLQMVVQSMGKSYPDAVRIEGFRLSQCLLRSQENCLKVMDTCGEALVDAIICGMEETGMHSRKFVNKNSSILVEACRLALVTRWAGDHHISFWKQRIDKVLLNLLIENIHDLSEEHVSSLDKQISIAKEGLKTNHQLCVRGYVWDILGWLTIHSGENFNPCIHGSGLYINLIIICACLTFEDVIKKWCRIYQKDADDSFQSEPASRAVLMMIYSPCNYISSQARLIFSKTYSSDHFTSLAHTLEYASSLESYGSFDKLQLIINLIGLISFLSLPHHHTLEGKYIRTVAFIVKRCLGNDIDVSRLSLAPHLHTTLYEKSCCWMDAEDWEGSNILLFYGLWGLAEMVHQSAPLQNNSRISIVDIEYFEAQLVRKLLEICSNASFTHGLRWYAAYILSHFGFYGFPNELGKRVGRCLNEKEYADIQLFLANGNTLSVHGVILAVRCSSLLPPEVSLVKEKRIDGQSIREVRLSSHVDYEALVKLLEYVYVGYFHADEEIVKKLKILAKRCDLQPLLQMLHRQSPKWGTSFPSFDLTPSLVSAGSCFWDVILESKQEKLEGWTCCTCSHSVPHLHVHKVILQSGCDYLQGLFRSGMKESNSPIIKVPTSWEAANKLVHWFYSSELPNPPSGCLWDNMDDEQKLCSLQSYVELYWLSEFWILEDVQEACWNVIVSYLDNSKQLSLKMLKMAGDLSLWKLADVAAIHLAPSYSQLRDSCELEDLDDALVHLICSASTQLSQNG 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral875g00053 873 SUPERFAMILY POZ domain 705 805 IPR011333 -
Pral875g00053 873 PANTHER OS06G0674800 PROTEIN 7 872 IPR044953 -
Pral875g00053 873 ProSiteProfiles BTB domain profile. 556 630 IPR000210 GO:0005515
Pral875g00053 873 CDD BTB_POZ_ZBTB_KLHL-like 705 757 - -
Pral875g00053 873 Gene3D Potassium Channel Kv1.1; Chain A 538 655 IPR011333 -
Pral875g00053 873 ProSiteProfiles BTB domain profile. 680 761 IPR000210 GO:0005515
Pral875g00053 873 Pfam BTB/POZ domain 705 765 IPR000210 GO:0005515
Pral875g00053 873 Pfam BTB/POZ domain 550 652 IPR000210 GO:0005515
Pral875g00053 873 Gene3D Potassium Channel Kv1.1; Chain A 675 871 IPR011333 -
Pral875g00053 873 SMART BTB_4 695 808 IPR000210 GO:0005515
Pral875g00053 873 SMART BTB_4 556 660 IPR000210 GO:0005515
Pral875g00053 873 SUPERFAMILY POZ domain 535 652 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral875g00053 Pral-Chr875 344447 348551 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pral875g00053 BTB 2e-05 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral875g00053 - - mtr:25487018 1135.94