Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral875g00052 ATGAAATCGAGCGGTGACAAAGATAAAAATCGAGGCGTGAGCTTGCAAATGAACAACCTCCACCAGCGTCTTCTTCATGCATTGAACCTAGGCACCAGATATTTTGACGAGAAGACAAACCAATGGAAATGGCAGAGCGCAAACATTGAAGTACAGAAACAAGTTATACGCTCAATTGATGTGTTTCTTGATTTTGTGTCTGGAGATGCACGTGCAGCACATCATAGTATTGTGAAGGATTCTGTTGCTGATATTTTGGGAGCACTATTGTGGATTCTTCGATGCAAAAATAGACCCTTGTTATGTATGGCAGCAAATGTAGCAGTAAAGCTAATGTCTTCGCTTTTGGGCTCAATATTGTTGTGGTGGCCTCCAACTCGGTTTCCTGTTTGGAATGATGTTCAACTGATAAATACTTTGTCAGATATGTATGCAAGGACAGATATTTCTACCAAACTTGTAATTTTGAAGCTGTACACATCTTTAGCTTTATGTGGATCTGTGGCCAAAAAACTTATAGAGAATGGAGAAGTCTTTCTACAAATGGTTGTGCAATCCATGGGAAAATCATACCCCGATGCTGTGAGAATAGAAGGCTTTAGGCTTTCTCAATGTCTATTGAGGTCCCAAGAGAATTGTTTGAAAGTGATGGATACATGTGGTGAAGCTCTTGTTGATGCCATAATTTGTGGGATGGAAGAAACAGGGATGCATTCTAGAAAATTTGTAAACAAGAATAGTTCTATATTAGTGGAAGCATGCCGATTGGCTTTAGTAACTCGTTGGGCAGGTGATCATCATATCAGTTTTTGGAAGCAAAGAATTGATAAAGTCCTCCTTAATCTTTTGATAGAAAATATTCATGATTTATCAGAGGAACATGTTTCTTCATTGGACAAACAAATATCCATTGCAAAGGAGGGTTTAAAAACCAATCATCAGCTTTGTGTGAGGGGTTATGTGTGGGACATTCTTGGTTGGCTCACAATACATTCTGGAGAAAATTTCAACCCATGTATCCATGGAAGTGGGCTCTACATCAACCTGATTATCATATGTGCATGCTTAACTTTTGAGGATGTGATTAAGAAATGGTGCCGAATATATCAAAAGGATGCTGATGATAGTTTTCAGAGTGAACCAGCATCAAGGGCTGTTCTAATGATGATTTATTCTCCCTGTAATTACATTTCATCCCAAGCCAGGCTCATATTTTCTAAGACATACTCTTCAGATCATTTCACTAGCTTAGCACATACGCTAGAATATGCATCATCACTTGAAAGTTATGGGTCGTTTGATAAGCTCCAACTTATCATCAACTTGATTGGATTGATCTCTTTTTTAAGTTTACCTCATCATCATACACTTGAAGGCAAATACATAAGGACAGTTGCTTTCATAGTAAAACGATGCTTAGGCAATGATATTGATGTATCAAGGCTCAGCTTAGCTCCTCATTTGCATACTACATTGTATGAAAAATCCTGTTGTTGGATGGACGCAGAAGATTGGGAAGGTTCCAATATTCTCTTGTTTTATGGTTTGTGGGGCTTAGCTGAAATGGTTCACCAATCTGCCCCTTTACAAAATAATTCTCGCATATCTATTGTTGATATAGAATATTTTGAAGCTCAGTTAGTTCGCAAACTCCTTGAGATTTGCAGTAATGCCTCTTTTACTCATGGTTTAAGATGGTATGCAGCTTATATTCTTAGTCATTTTGGATTTTATGGTTTCCCAAATGAACTAGGCAAAAGGGTTGGGAGATGCCTTAATGAGAAAGAATATGCAGATATTCAACTCTTTTTGGCCAATGGCAATACTTTGAGTGTTCATGGTGTTATTCTTGCTGTTCGATGTTCATCATTGCTCCCTCCCGAAGTTAGTCTTGTTAAGGAAAAAAGAATCGATGGCCAATCCATTAGGGAAGTTCGTTTGTCTTCTCATGTTGATTATGAAGCATTAGTGAAGTTGTTGGAGTATGTATATGTGGGATACTTCCATGCCGATGAAGAAATTGTAAAGAAGTTGAAAATTCTTGCTAAGCGCTGCGATCTGCAGCCTCTCCTGCAAATGCTTCATAGACAAAGTCCAAAATGGGGAACATCATTCCCCAGCTTTGATCTCACTCCATCTCTTGTTTCAGCTGGAAGTTGTTTTTGGGATGTTATATTGGAATCTAAACAAGAAAAACTTGAAGGATGGACATGCTGTACATGCTCTCATTCAGTTCCACACTTGCATGTTCATAAAGTTATTTTACAATCTGGCTGTGACTACTTGCAAGGATTGTTTCGTTCAGGAATGAAAGAGAGTAATTCACCAATCATAAAGGTTCCTACTAGTTGGGAAGCAGCGAATAAGCTTGTGCACTGGTTCTATTCCAGTGAACTGCCAAATCCTCCATCCGGATGTTTGTGGGATAATATGGATGATGAGCAAAAACTATGCAGCTTACAGTCATACGTGGAGCTTTATTGGCTTTCAGAATTCTGGATTTTAGAAGATGTTCAAGAAGCTTGCTGGAACGTGATTGTATCTTATCTTGATAATTCAAAGCAGTTGTCCCTTAAAATGCTTAAAATGGCCGGCGACCTCTCTCTATGGAAATTAGCTGATGTAGCAGCAATTCACTTGGCTCCTTCATATAGTCAATTACGAGATTCTTGTGAACTTGAAGATTTGGATGATGCTCTTGTTCATTTAATTTGTTCTGCTTCTACTCAACTTAGCCAAAATGGATGA 2748 0.3846 MKSSGDKDKNRGVSLQMNNLHQRLLHALNLGTRYFDEKTNQWKWQSANIEVQKQVIRSIDVFLDFVSGDARAAHHSIVKDSVADILGALLWILRCKNRPLLCMAANVAVKLMSSLLGSILLWWPPTRFPVWNDVQLINTLSDMYARTDISTKLVILKLYTSLALCGSVAKKLIENGEVFLQMVVQSMGKSYPDAVRIEGFRLSQCLLRSQENCLKVMDTCGEALVDAIICGMEETGMHSRKFVNKNSSILVEACRLALVTRWAGDHHISFWKQRIDKVLLNLLIENIHDLSEEHVSSLDKQISIAKEGLKTNHQLCVRGYVWDILGWLTIHSGENFNPCIHGSGLYINLIIICACLTFEDVIKKWCRIYQKDADDSFQSEPASRAVLMMIYSPCNYISSQARLIFSKTYSSDHFTSLAHTLEYASSLESYGSFDKLQLIINLIGLISFLSLPHHHTLEGKYIRTVAFIVKRCLGNDIDVSRLSLAPHLHTTLYEKSCCWMDAEDWEGSNILLFYGLWGLAEMVHQSAPLQNNSRISIVDIEYFEAQLVRKLLEICSNASFTHGLRWYAAYILSHFGFYGFPNELGKRVGRCLNEKEYADIQLFLANGNTLSVHGVILAVRCSSLLPPEVSLVKEKRIDGQSIREVRLSSHVDYEALVKLLEYVYVGYFHADEEIVKKLKILAKRCDLQPLLQMLHRQSPKWGTSFPSFDLTPSLVSAGSCFWDVILESKQEKLEGWTCCTCSHSVPHLHVHKVILQSGCDYLQGLFRSGMKESNSPIIKVPTSWEAANKLVHWFYSSELPNPPSGCLWDNMDDEQKLCSLQSYVELYWLSEFWILEDVQEACWNVIVSYLDNSKQLSLKMLKMAGDLSLWKLADVAAIHLAPSYSQLRDSCELEDLDDALVHLICSASTQLSQNG 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral875g00052 915 Pfam BTB/POZ domain 592 694 IPR000210 GO:0005515
Pral875g00052 915 Pfam BTB/POZ domain 747 807 IPR000210 GO:0005515
Pral875g00052 915 Gene3D Potassium Channel Kv1.1; Chain A 580 697 IPR011333 -
Pral875g00052 915 SUPERFAMILY POZ domain 747 847 IPR011333 -
Pral875g00052 915 ProSiteProfiles BTB domain profile. 722 803 IPR000210 GO:0005515
Pral875g00052 915 SUPERFAMILY POZ domain 577 694 IPR011333 -
Pral875g00052 915 PANTHER OS06G0674800 PROTEIN 6 115 IPR044953 -
Pral875g00052 915 Gene3D Potassium Channel Kv1.1; Chain A 717 913 IPR011333 -
Pral875g00052 915 CDD BTB_POZ_ZBTB_KLHL-like 747 799 - -
Pral875g00052 915 SMART BTB_4 598 702 IPR000210 GO:0005515
Pral875g00052 915 SMART BTB_4 737 850 IPR000210 GO:0005515
Pral875g00052 915 ProSiteProfiles BTB domain profile. 598 672 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral875g00052 Pral-Chr875 343935 348551 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pral875g00052 BTB 2.2e-05 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral875g00052 - - mtr:25487018 1080.47