Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral875g00051 ATGAAATCGAGCGGTGACAAAGATAAAAATCGAGGCGTGAGCTTGCAAATGAACAACCTCCACCAGCGTCTTCTTCATGCATTGAACCTAGGCACCAGATATTTTGACGAGAAGACAAACCAATGGAAATGGCAGAGCGCAAACATTGAAGTACAGAAACAAGTTATACGCTCAATTGATGTGTTTCTTGATTTTGTGTCTGGAGATGCACGTGCAGCACATCATAGTATTGTGAAGGATTCTGTTGCTGATATTTTGGGAGCACTATTGTGGATTCTTCGATGCAAAAATAGACCCTTGTTATGTATGGCAGCAAATGTAGCAGTAAAGCTAGTTAGTGTTTTACCCCATTCAATATTCGAATCTTATATATTAGATCTTGTCTATGCTCTGTCATCCTTGCTATCTTCACCTTTTGTAGAGGTTGCAATACCCTGTTCTACTTCTTTGAATTTGGTAATTTCAAATTTAAATGCCAGTAGTGCAAAGGCAGTTTGGGAGATGTCTTCGCTTTTGGGCTCAATATTGTTGTGGTGGCCTCCAACTCGGTTTCCTGTTTGGAATGATGTTCAACTGATAAATACTTTGTCAGATATGTATGCAAGGACAGATATTTCTACCAAACTTGTAATTTTGAAGCTGTACACATCTTTAGCTTTATGTGGATCTGTGGCCAAAAAACTTATAGAGAATGGAGAAGTCTTTCTACAAATGGTTGTGCAATCCATGGGAAAATCATACCCCGATGCTGTGAGAATAGAAGGCTTTAGGCTTTCTCAATGTCTATTGAGGTCCCAAGAGAATTGTTTGAAAGTGATGGATACATGTGGTGAAGCTCTTGTTGATGCCATAATTTGTGGGATGGAAGAAACAGGGATGCATTCTAGAAAATTTGTAAACAAGAATAGTTCTATATTAGTGGAAGCATGCCGATTGGCTTTAGTAACTCGTTGGGCAGGTGATCATCATATCAGTTTTTGGAAGCAAAGAATTGATAAAGTCCTCCTTAATCTTTTGATAGAAAATATTCATGATTTATCAGAGGAACATGTTTCTTCATTGGACAAACAAATATCCATTGCAAAGGAGGGTTTAAAAACCAATCATCAGCTTTGTGTGAGGGGTTATGTGTGGGACATTCTTGGTTGGCTCACAATACATTCTGGAGAAAATTTCAACCCATGTATCCATGGAAGTGGGCTCTACATCAACCTGATTATCATATGTGCATGCTTAACTTTTGAGGATGTGATTAAGAAATGGTGCCGAATATATCAAAAGGATGCTGATGATAGTTTTCAGAGTGAACCAGCATCAAGGGCTGTTCTAATGATGATTTATTCTCCCTGTAATTACATTTCATCCCAAGCCAGGCTCATATTTTCTAAGACATACTCTTCAGATCATTTCACTAGCTTAGCACATACGCTAGAATATGCATCATCACTTGAAAGTTATGGGTCGTTTGATAAGCTCCAACTTATCATCAACTTGATTGGATTGATCTCTTTTTTAAGTTTACCTCATCATCATACACTTGAAGGCAAATACATAAGGACAGTTGCTTTCATAGTAAAACGATGCTTAGGCAATGATATTGATGTATCAAGGCTCAGCTTAGCTCCTCATTTGCATACTACATTGTATGAAAAATCCTGTTGTTGGATGGACGCAGAAGATTGGGAAGGTTCCAATATTCTCTTGTTTTATGGTTTGTGGGGCTTAGCTGAAATGGTTCACCAATCTGCCCCTTTACAAAATAATTCTCGCATATCTATTGTTGATATAGAATATTTTGAAGCTCAGTTAGTTCGCAAACTCCTTGAGATTTGCAGTAATGCCTCTTTTACTCATGGTTTAAGATGGTATGCAGCTTATATTCTTAGTCATTTTGGATTTTATGGTTTCCCAAATGAACTAGGCAAAAGGGTTGGGAGATGCCTTAATGAGAAAGAATATGCAGATATTCAACTCTTTTTGGCCAATGGCAATACTTTGAGTGTTCATGGTGTTATTCTTGCTGTTCGATGTTCATCATTGCTCCCTCCCGAAGTTAGTCTTGTTAAGGAAAAAAGAATCGATGGCCAATCCATTAGGGAAGTTCGTTTGTCTTCTCATGTTGATTATGAAGCATTAGTGAAGTTGTTGGAGTATGTATATGTGGGATACTTCCATGCCGATGAAGAAATTGTAAAGAAGTTGAAAATTCTTGCTAAGCGCTGCGATCTGCAGCCTCTCCTGCAAATGCTTCATAGACAAAGTCCAAAATGGGGAACATCATTCCCCAGCTTTGATCTCACTCCATCTCTTGTTTCAGCTGGAAGTTGTTTTTGGGATGTTATATTGGAATCTAAACAAGAAAAACTTGAAGGATGGACATGCTGTACATGCTCTCATTCAGTTCCACACTTGCATGTTCATAAAGTTATTTTACAATCTGGCTGTGACTACTTGCAAGGATTGTTTCGTTCAGGAATGAAAGAGAGTAATTCACCAATCATAAAGGTTCCTACTAGTTGGGAAGCAGCGAATAAGCTTGTGCACTGGTTCTATTCCAGTGAACTGCCAAATCCTCCATCCGGATGTTTGTGGGATAATATGGATGATGAGCAAAAACTATGCAGCTTACAGTCATACGTGGAGCTTTATTGGCTTTCAGAATTCTGGATTTTAGAAGATGTTCAAGAAGCTTGCTGGAACGTGATTGTATCTTATCTTGATAATTCAAAGCAGTTGTCCCTTAAAATGCTTAAAATGGCCGGCGACCTCTCTCTATGGAAATTAGCTGATGTAGCAGCAATTCACTTGGCTCCTTCATATAGTCAATTACGAGATTCTTGTGAACTTGAAGATTTGGATGATGCTCTTGTTCATTTAATTTGTTCTGCTTCTACTCAACTTAGCCAAAATGGATGA 2916 0.3831 MKSSGDKDKNRGVSLQMNNLHQRLLHALNLGTRYFDEKTNQWKWQSANIEVQKQVIRSIDVFLDFVSGDARAAHHSIVKDSVADILGALLWILRCKNRPLLCMAANVAVKLVSVLPHSIFESYILDLVYALSSLLSSPFVEVAIPCSTSLNLVISNLNASSAKAVWEMSSLLGSILLWWPPTRFPVWNDVQLINTLSDMYARTDISTKLVILKLYTSLALCGSVAKKLIENGEVFLQMVVQSMGKSYPDAVRIEGFRLSQCLLRSQENCLKVMDTCGEALVDAIICGMEETGMHSRKFVNKNSSILVEACRLALVTRWAGDHHISFWKQRIDKVLLNLLIENIHDLSEEHVSSLDKQISIAKEGLKTNHQLCVRGYVWDILGWLTIHSGENFNPCIHGSGLYINLIIICACLTFEDVIKKWCRIYQKDADDSFQSEPASRAVLMMIYSPCNYISSQARLIFSKTYSSDHFTSLAHTLEYASSLESYGSFDKLQLIINLIGLISFLSLPHHHTLEGKYIRTVAFIVKRCLGNDIDVSRLSLAPHLHTTLYEKSCCWMDAEDWEGSNILLFYGLWGLAEMVHQSAPLQNNSRISIVDIEYFEAQLVRKLLEICSNASFTHGLRWYAAYILSHFGFYGFPNELGKRVGRCLNEKEYADIQLFLANGNTLSVHGVILAVRCSSLLPPEVSLVKEKRIDGQSIREVRLSSHVDYEALVKLLEYVYVGYFHADEEIVKKLKILAKRCDLQPLLQMLHRQSPKWGTSFPSFDLTPSLVSAGSCFWDVILESKQEKLEGWTCCTCSHSVPHLHVHKVILQSGCDYLQGLFRSGMKESNSPIIKVPTSWEAANKLVHWFYSSELPNPPSGCLWDNMDDEQKLCSLQSYVELYWLSEFWILEDVQEACWNVIVSYLDNSKQLSLKMLKMAGDLSLWKLADVAAIHLAPSYSQLRDSCELEDLDDALVHLICSASTQLSQNG 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral875g00051 971 ProSiteProfiles BTB domain profile. 778 859 IPR000210 GO:0005515
Pral875g00051 971 ProSiteProfiles BTB domain profile. 654 728 IPR000210 GO:0005515
Pral875g00051 971 SUPERFAMILY ARM repeat 45 448 IPR016024 -
Pral875g00051 971 Pfam BTB/POZ domain 648 750 IPR000210 GO:0005515
Pral875g00051 971 Pfam BTB/POZ domain 803 863 IPR000210 GO:0005515
Pral875g00051 971 Gene3D Potassium Channel Kv1.1; Chain A 774 969 IPR011333 -
Pral875g00051 971 SUPERFAMILY POZ domain 633 750 IPR011333 -
Pral875g00051 971 PANTHER OS06G0674800 PROTEIN 6 167 IPR044953 -
Pral875g00051 971 SUPERFAMILY POZ domain 803 903 IPR011333 -
Pral875g00051 971 Gene3D Potassium Channel Kv1.1; Chain A 636 753 IPR011333 -
Pral875g00051 971 SMART BTB_4 654 758 IPR000210 GO:0005515
Pral875g00051 971 SMART BTB_4 793 906 IPR000210 GO:0005515
Pral875g00051 971 CDD BTB_POZ_ZBTB_KLHL-like 803 855 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral875g00051 Pral-Chr875 343935 348551 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pral875g00051 BTB 2.4e-05 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral875g00051 - - mtr:25487018 1283.86