Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral875g00050 ATGAAATCGAGCGGTGACAAAGATAAAAATCGAGGCGTGAGCTTGCAAATGAACAACCTCCACCAGCGTCTTCTTCATGCATTGAACCTAGGCACCAGATATTTTGACGAGAAGACAAACCAATGGAAATGGCAGAGCGCAAACATTGAAGTACAGAAACAAGTTATACGCTCAATTGATGTGTTTCTTGATTTTGTGTCTGGAGATGCACGTGCAGCACATCATAGTATTGTGAAGGATTCTGTTGCTGATATTTTGGGAGCACTATTGTGGATTCTTCGATGCAAAAATAGACCCTTGTTATGTATGGCAGCAAATGTAGCAGTAAAGCTAGTTAGTGTTTTACCCCATTCAATATTCGAATCTTATATATTAGATCTTGTCTATGCTCTGTCATCCTTGCTATCTTCACCTTTTGTAGAGGTTGCAATACCCTGTTCTACTTCTTTGAATTTGGTAATTTCAAATTTAAATGCCAGTAGTGCAAAGGCAGTTTGGGAGGTACTGAAACAAACAGAATGTGTAATTCATATTGTGGGCAATATACGCAAATTTGTTGGAGTTGAAATTCCAATGAAAATTGAATATTTCGAACAGATGTCTTCGCTTTTGGGCTCAATATTGTTGTGGTGGCCTCCAACTCGGTTTCCTGTTTGGAATGATGTTCAACTGATAAATACTTTGTCAGATATGTATGCAAGGACAGATATTTCTACCAAACTTGTAATTTTGAAGCTGTACACATCTTTAGCTTTATGTGGATCTGTGGCCAAAAAACTTATAGAGAATGGAGAAGTCTTTCTACAAATGGTTGTGCAATCCATGGGAAAATCATACCCCGATGCTGTGAGAATAGAAGGCTTTAGGCTTTCTCAATGTCTATTGAGGTCCCAAGAGAATTGTTTGAAAGTGATGGATACATGTGGTGAAGCTCTTGTTGATGCCATAATTTGTGGGATGGAAGAAACAGGGATGCATTCTAGAAAATTTGTAAACAAGAATAGTTCTATATTAGTGGAAGCATGCCGATTGGCTTTAGTAACTCGTTGGGCAGGTGATCATCATATCAGTTTTTGGAAGCAAAGAATTGATAAAGTCCTCCTTAATCTTTTGATAGAAAATATTCATGATTTATCAGAGGAACATGTTTCTTCATTGGACAAACAAATATCCATTGCAAAGGAGGGTTTAAAAACCAATCATCAGCTTTGTGTGAGGGGTTATGTGTGGGACATTCTTGGTTGGCTCACAATACATTCTGGAGAAAATTTCAACCCATGTATCCATGGAAGTGGGCTCTACATCAACCTGATTATCATATGTGCATGCTTAACTTTTGAGGATGTGATTAAGAAATGGTGCCGAATATATCAAAAGGATGCTGATGATAGTTTTCAGAGTGAACCAGCATCAAGGGCTGTTCTAATGATGATTTATTCTCCCTGTAATTACATTTCATCCCAAGCCAGGCTCATATTTTCTAAGACATACTCTTCAGATCATTTCACTAGCTTAGCACATACGCTAGAATATGCATCATCACTTGAAAGTTATGGGTCGTTTGATAAGCTCCAACTTATCATCAACTTGATTGGATTGATCTCTTTTTTAAGTTTACCTCATCATCATACACTTGAAGGCAAATACATAAGGACAGTTGCTTTCATAGTAAAACGATGCTTAGGCAATGATATTGATGTATCAAGGCTCAGCTTAGCTCCTCATTTGCATACTACATTGTATGAAAAATCCTGTTGTTGGATGGACGCAGAAGATTGGGAAGGTTCCAATATTCTCTTGTTTTATGGTTTGTGGGGCTTAGCTGAAATGGTTCACCAATCTGCCCCTTTACAAAATAATTCTCGCATATCTATTGTTGATATAGAATATTTTGAAGCTCAGTTAGTTCGCAAACTCCTTGAGATTTGCAGTAATGCCTCTTTTACTCATGGTTTAAGATGGTATGCAGCTTATATTCTTAGTCATTTTGGATTTTATGGTTTCCCAAATGAACTAGGCAAAAGGGTTGGGAGATGCCTTAATGAGAAAGAATATGCAGATATTCAACTCTTTTTGGCCAATGGCAATACTTTGAGTGTTCATGGTGTTATTCTTGCTGTTCGATGTTCATCATTGCTCCCTCCCGAAGTTAGTCTTGTTAAGGAAAAAAGAATCGATGGCCAATCCATTAGGGAAGTTCGTTTGTCTTCTCATGTTGATTATGAAGCATTAGTGAAGTTGTTGGAGTATGTATATGTGGGATACTTCCATGCCGATGAAGAAATTGTAAAGAAGTTGAAAATTCTTGCTAAGCGCTGCGATCTGCAGCCTCTCCTGCAAATGCTTCATAGACAAAGTCCAAAATGGGGAACATCATTCCCCAGCTTTGATCTCACTCCATCTCTTGTTTCAGCTGGAAGTTGTTTTTGGGATGTTATATTGGAATCTAAACAAGAAAAACTTGAAGGATGGACATGCTGTACATGCTCTCATTCAGTTCCACACTTGCATGTTCATAAAGTTATTTTACAATCTGGCTGTGACTACTTGCAAGGATTGTTTCGTTCAGGAATGAAAGAGAGTAATTCACCAATCATAAAGGTTCCTACTAGTTGGGAAGCAGCGAATAAGCTTGTGCACTGGTTCTATTCCAGTGAACTGCCAAATCCTCCATCCGGATGTTTGTGGGATAATATGGATGATGAGCAAAAACTATGCAGCTTACAGTCATACGTGGAGCTTTATTGGCTTTCAGAATTCTGGATTTTAGAAGATGTTCAAGAAGCTTGCTGGAACGTGATTGTATCTTATCTTGATAATTCAAAGCAGTTGTCCCTTAAAATGCTTAAAATGGCCGGCGACCTCTCTCTATGGAAATTAGCTGATGTAGCAGCAATTCACTTGGCTCCTTCATATAGTCAATTACGAGATTCTTGTGAACTTGAAGATTTGGATGATGCTCTTGTTCATTTAATTTGTTCTGCTTCTACTCAACTTAGCCAAAATGGATGA 3012 0.3808 MKSSGDKDKNRGVSLQMNNLHQRLLHALNLGTRYFDEKTNQWKWQSANIEVQKQVIRSIDVFLDFVSGDARAAHHSIVKDSVADILGALLWILRCKNRPLLCMAANVAVKLVSVLPHSIFESYILDLVYALSSLLSSPFVEVAIPCSTSLNLVISNLNASSAKAVWEVLKQTECVIHIVGNIRKFVGVEIPMKIEYFEQMSSLLGSILLWWPPTRFPVWNDVQLINTLSDMYARTDISTKLVILKLYTSLALCGSVAKKLIENGEVFLQMVVQSMGKSYPDAVRIEGFRLSQCLLRSQENCLKVMDTCGEALVDAIICGMEETGMHSRKFVNKNSSILVEACRLALVTRWAGDHHISFWKQRIDKVLLNLLIENIHDLSEEHVSSLDKQISIAKEGLKTNHQLCVRGYVWDILGWLTIHSGENFNPCIHGSGLYINLIIICACLTFEDVIKKWCRIYQKDADDSFQSEPASRAVLMMIYSPCNYISSQARLIFSKTYSSDHFTSLAHTLEYASSLESYGSFDKLQLIINLIGLISFLSLPHHHTLEGKYIRTVAFIVKRCLGNDIDVSRLSLAPHLHTTLYEKSCCWMDAEDWEGSNILLFYGLWGLAEMVHQSAPLQNNSRISIVDIEYFEAQLVRKLLEICSNASFTHGLRWYAAYILSHFGFYGFPNELGKRVGRCLNEKEYADIQLFLANGNTLSVHGVILAVRCSSLLPPEVSLVKEKRIDGQSIREVRLSSHVDYEALVKLLEYVYVGYFHADEEIVKKLKILAKRCDLQPLLQMLHRQSPKWGTSFPSFDLTPSLVSAGSCFWDVILESKQEKLEGWTCCTCSHSVPHLHVHKVILQSGCDYLQGLFRSGMKESNSPIIKVPTSWEAANKLVHWFYSSELPNPPSGCLWDNMDDEQKLCSLQSYVELYWLSEFWILEDVQEACWNVIVSYLDNSKQLSLKMLKMAGDLSLWKLADVAAIHLAPSYSQLRDSCELEDLDDALVHLICSASTQLSQNG 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral875g00050 1003 SUPERFAMILY POZ domain 665 782 IPR011333 -
Pral875g00050 1003 Pfam BTB/POZ domain 835 895 IPR000210 GO:0005515
Pral875g00050 1003 Pfam BTB/POZ domain 680 782 IPR000210 GO:0005515
Pral875g00050 1003 SMART BTB_4 686 790 IPR000210 GO:0005515
Pral875g00050 1003 SMART BTB_4 825 938 IPR000210 GO:0005515
Pral875g00050 1003 ProSiteProfiles BTB domain profile. 686 760 IPR000210 GO:0005515
Pral875g00050 1003 Gene3D Potassium Channel Kv1.1; Chain A 805 1001 IPR011333 -
Pral875g00050 1003 PANTHER OS06G0674800 PROTEIN 6 1002 IPR044953 -
Pral875g00050 1003 Gene3D Potassium Channel Kv1.1; Chain A 668 785 IPR011333 -
Pral875g00050 1003 SUPERFAMILY ARM repeat 45 480 IPR016024 -
Pral875g00050 1003 CDD BTB_POZ_ZBTB_KLHL-like 835 887 - -
Pral875g00050 1003 ProSiteProfiles BTB domain profile. 810 891 IPR000210 GO:0005515
Pral875g00050 1003 SUPERFAMILY POZ domain 835 935 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral875g00050 Pral-Chr875 343935 348551 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pral875g00050 BTB 2.5e-05 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral875g00050 - - mtr:25487018 1315.44