Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral875g00029 ATGAGCAGCATAAGCATGGTAGAGGCAAAGTTGCCTCCTGGGTTCAGGTTTCATCCCAGAGATGAAGAACTTGTATGTGATTACTTAATGAAGAAGGTGACACACTGTGACTCCTCTCTCATGATCGATGTTGATCTTAACAAGTGTGAACCATGGGACATTCCTGAGGCGGCATGTGTAGGAGGGAAGGAGTTGTATTTCTACACACAGCGAGACCGCAAGTACGCCACTGGCCTACGCACAAATCGTGCCACTGCCTCTGGCTATTGGAAGGCCACAGGGAAGGACAGGCCGATCCTTCGCAAGGGCACCCTTGTTGGTATGAGAAAGACATTGGTTTTCTATCAAGGAAGGGCACCCAAAGGGAGAAAGACCGAGTGGGTCATGCATGAGTTTCGCCTTGAAGGTCCCCTTGGCCCTCCTAAACTTTCTTCAGCCAAGGAGGATTGGGTTCTGTGCAGGGCGTTCCTCAAAAACAGAGAGCCTTCGGCGAAACAGAGCATCGGAAGCTGCTACGACGACACAGGCTCTTCATCTCTACCTGCATTAATGGATTCTTACATCAGTTTCGACCAACAGGCTCAAGCTCAAACTCATCAAGATGACTACGAGCAAGTGCCCTGCTTCTCCATCTTCTCGCAGATCCATACAAACCCTAACTTCAACCACACAAGCAGCGCAAGCATTATGGAGCCAAATTTCGTAGTACCTGTCAAGAACCACAATGTGACCACCACATATGGTGGAGGAACGACGCCATGCGATCTGGATTCTTCTTGCTTAGATCCTAATTTGGATTTCGCTGGTGATAGTAGAAAGTTATTGAAAGCTTGCGTGGATCAGCTCACTAAGATTGATCAGAGAAAACAACAAAGCCAAATTAGTACTCTCAAAGGTTCACCAAGCTTAGGGGAAGCAAGTTCTGAGAGTCTTTTATCTGATGTGTGTATGCCCAGCTTGTGGAGCAATTTCTGA 975 0.4769 MSSISMVEAKLPPGFRFHPRDEELVCDYLMKKVTHCDSSLMIDVDLNKCEPWDIPEAACVGGKELYFYTQRDRKYATGLRTNRATASGYWKATGKDRPILRKGTLVGMRKTLVFYQGRAPKGRKTEWVMHEFRLEGPLGPPKLSSAKEDWVLCRAFLKNREPSAKQSIGSCYDDTGSSSLPALMDSYISFDQQAQAQTHQDDYEQVPCFSIFSQIHTNPNFNHTSSASIMEPNFVVPVKNHNVTTTYGGGTTPCDLDSSCLDPNLDFAGDSRKLLKACVDQLTKIDQRKQQSQISTLKGSPSLGEASSESLLSDVCMPSLWSNF 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral875g00029 324 Gene3D NAC domain 20 162 IPR036093 GO:0003677|GO:0006355
Pral875g00029 324 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 222 - -
Pral875g00029 324 Pfam No apical meristem (NAM) protein 12 134 IPR003441 GO:0003677|GO:0006355
Pral875g00029 324 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Pral875g00029 324 SUPERFAMILY NAC domain 2 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral875g00029 Pral-Chr875 283076 287448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral875g00029 2 322 NAC Transcription Factor Family AT1G56010 58.258 6.04e-121 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral875g00029 NAM 9.6e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral875g00029 - - ahf:112703413 445.277