Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral875g00013 ATGGAAGAGTATACCTTTTACCCTCCCGATACAGATCTCGATCTCAGCTTTACCAGCACCACCTCCGCCGGCACTGACCGGACCTTTGCTTCATCCAGTGCTCGCACGAGCTTGGCTCGCAGCAGCTTGACTCTCAGCTTCAATGAACGTCTGTCCACTGCTTCCGCTACCGCCGGGACTTCCTCTTCTACACTATTCCTCCGACCGCATCGGGCCTCCGATCCTCATTGGTCTGCGATCAAAGCTGCCACCACTCTCTCGTCAGACGGTGCCCTTCACCTCCACCACCTCAAGCTCCTCCGCCATCTCGGCACCGGGAATCTCGGGCGAGTATTCCTCTGCCGTCTTCGTGACTATGATCACGCAAACTTCGCTCTCAAGGTTGTCGATAAGGACTTACTAAGCAGCAGGAAGCTCTCTCATGTACAAATGGAGGGTGAGATCCTGTCCATGCTGGACCATCCTTTTCTTCCTACGCTCTACGCTAAATTGGAGGTCTCTCATTACACGTGTCTGTTGATAGATTACTGCCCCGGGGGCGACCTCCACTCTCTCCTACGAAAACAGCCGGGAAACCGGCTACCGCTCCAGGCTGTTCGGTTCTTCGCGGCGGAGGTCCTGGTAGCGTTGGAATATTTGCATGCGCTTGGCATCGTGTATAGGGATCTGAAACCAGAGAACGTTCTATTGCGGGAAGACGGCCACGTCATGCTGTCCGACTTCGATTTGTGCTTCAAGGCCGACGTGGCCCCCACATTCCGGTGTCGGGCAGAGCCAACGAGGAGGAAGAAGCGCGCGTGCAACTGTTTCAGTGGCGCCAGAGCTAGATCGCCGGCGCAGCTGGTGGAAGCGGAGTTCGTGGCGGAGCCAAACGGGGCTTACTCGAGGTCATGCGTTGGGACGCACGAGTACTTAGCGCCGGAGTTGGTCTCCGGCAACGGCCATGGCAACGGTGTGGACTGGTGGGCGTTTGGGGTGTTCATTTACGAGCTGTTGTACGGGACGACGCCGTTTAAAGGATGGAGCAAAGAGAGCACCCTGCGTAATATAGCATCAAGTCGAAACGTGAGCTTCCACGTGGCGGAAGTAGAGGAAGAGGGCATGGCGGAAGCGAGGGATCTGATAGAGAAACTGCTAGTGAAGGAACCAAGGAGAAGGCTAGGATGCGGCAGAGGAGCGACGGATATAAAACGACACGCGTTTTTTGGCGGGATCAAATGGCCGTTGATCCGAACCTACCGGCCACCCGAGGTTCGGGGGCTAACGATCAAGAAGGGGAGGTCGCATGTGAACAGTCACGTGAGCCATAGGAGAATACGGTGGTGGTGGAAGGGGCTTGATTATATTCTAAAGAGAAATAATAAGGGATATAACTTAATCTCAAACTATAGTAATGGTAATTACTATCGTTACGTTAATGGTAATAAGGCTAGGAAATGTGTTTGA 1446 0.5415 MEEYTFYPPDTDLDLSFTSTTSAGTDRTFASSSARTSLARSSLTLSFNERLSTASATAGTSSSTLFLRPHRASDPHWSAIKAATTLSSDGALHLHHLKLLRHLGTGNLGRVFLCRLRDYDHANFALKVVDKDLLSSRKLSHVQMEGEILSMLDHPFLPTLYAKLEVSHYTCLLIDYCPGGDLHSLLRKQPGNRLPLQAVRFFAAEVLVALEYLHALGIVYRDLKPENVLLREDGHVMLSDFDLCFKADVAPTFRCRAEPTRRKKRACNCFSGARARSPAQLVEAEFVAEPNGAYSRSCVGTHEYLAPELVSGNGHGNGVDWWAFGVFIYELLYGTTPFKGWSKESTLRNIASSRNVSFHVAEVEEEGMAEARDLIEKLLVKEPRRRLGCGRGATDIKRHAFFGGIKWPLIRTYRPPEVRGLTIKKGRSHVNSHVSHRRIRWWWKGLDYILKRNNKGYNLISNYSNGNYYRYVNGNKARKCV 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral875g00013 481 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Pral875g00013 481 SUPERFAMILY Protein kinase-like (PK-like) 76 421 IPR011009 -
Pral875g00013 481 Gene3D Phosphorylase Kinase; domain 1 95 180 - -
Pral875g00013 481 Gene3D Transferase(Phosphotransferase) domain 1 181 249 - -
Pral875g00013 481 SMART serkin_6 97 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral875g00013 481 Pfam Protein kinase domain 99 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral875g00013 481 FunFam Serine/threonine-protein kinase WAG2 181 247 - -
Pral875g00013 481 CDD STKc_phototropin_like 104 418 - -
Pral875g00013 481 FunFam Serine/threonine-protein kinase OXI1 293 420 - -
Pral875g00013 481 PANTHER FLIPPASE KINASE 1-RELATED 37 420 - -
Pral875g00013 481 Gene3D Transferase(Phosphotransferase) domain 1 295 420 - -
Pral875g00013 481 ProSiteProfiles Protein kinase domain profile. 97 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral875g00013 Pral-Chr875 177912 179505 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral875g00013 1 479 AGC Kinase Gene Family AT3G14370 65.650 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pral875g00013 Pkinase 1.6e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral875g00013 - - lja:Lj0g3v0200189.1 648.662