Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral873g00002 ATGAAGATAACATTCCTCGAGGCTCGAACCAGCAATGTTTCATGGCAATGGCAAATAGTGAAGAACGAATCTACTAAGAAGCCTGGTTCGAGCATAGACTATATAGAGTGCCATACACAGGGATTCCGTCTGCTTCAGAGGATGGGGCGGACTATGCTGCTCGTATCAGACTTCATTTTGTCATTCATGTGGGTATGCTCAGGGGTTCTGATTAAGCTGGTGGCAAACAAATATCTGGGATTGAGTCGTGAGCCACTCCGTGAGATCGTGAAGATTGCGATCGTCATTGCTAACATGTTCTTCTTTGCGTTTCTCCTAATCATTACCCGTGGGGGCGCCTACAATCCACTCACTGTTTTGGCTAATGCTGTTTCGGGGGATTTAAGCAAATTCCTTTACTGCGTTGCTGTTAGAATTCCTGTTCAGGTGATTGGATCTATTATGGGGGTCAAGCTTATGATTGATACCTTTCCGGAAGTAGGACGGGGACCACGTTTGAATATCGACATTCATCGAGGTGCTCTGATAGAAGGAATCCTAACATTTACAGTTGTTACCATATCACTTCGGCTTGGCACAAAAATCCCTGAAGGTTTCTTCATGAAGACCTGGATCTCCAGTGTCTGCAAGCTAGCACTTCACATATTTGGTTCTGATCTAACTGGTGGTTGTATGAATCCAGCCTCTGTAATGGGGTGGGCTTATGCTCGCGGGGATCACGTAACCAAGGAACACTTCGTTGTATACTGGATTGCCCCTATGGAGGCCACTGTACTGGCAGTATGGACCTTCAAATTGTTAGTACGGCCTGTAAAAGAAGACAAATCAAGCGCAAAACATAAATTACAGTGA 852 0.4519 MKITFLEARTSNVSWQWQIVKNESTKKPGSSIDYIECHTQGFRLLQRMGRTMLLVSDFILSFMWVCSGVLIKLVANKYLGLSREPLREIVKIAIVIANMFFFAFLLIITRGGAYNPLTVLANAVSGDLSKFLYCVAVRIPVQVIGSIMGVKLMIDTFPEVGRGPRLNIDIHRGALIEGILTFTVVTISLRLGTKIPEGFFMKTWISSVCKLALHIFGSDLTGGCMNPASVMGWAYARGDHVTKEHFVVYWIAPMEATVLAVWTFKLLVRPVKEDKSSAKHKLQ 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral873g00002 283 Gene3D Glycerol uptake facilitator protein. 33 280 IPR023271 -
Pral873g00002 283 PRINTS Major intrinsic protein family signature 247 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral873g00002 283 PRINTS Major intrinsic protein family signature 176 194 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral873g00002 283 PRINTS Major intrinsic protein family signature 52 71 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral873g00002 283 PRINTS Major intrinsic protein family signature 134 153 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral873g00002 283 PRINTS Major intrinsic protein family signature 207 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral873g00002 283 Pfam Major intrinsic protein 54 263 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral873g00002 283 SUPERFAMILY Aquaporin-like 48 274 IPR023271 -
Pral873g00002 283 PANTHER AQUAPORIN SIP2-1-RELATED 48 281 IPR044226 GO:0015267
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral873g00002 Pral-Chr873 10237 12342 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral873g00002 48 281 Major Intrinsic Protein MIP AT3G56950 58.298 2.23e-99 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral873g00002 K09875 - gmx:100786138 357.836