Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral871g00081 ATGGGGTTGAAACATACAAAGGAGGGGCCACCCAAAGTTGAAAACCTGAGTTTACATCATCACTTGATCAATTACCTCGCAGAAAATTTATATATTCGTAATTTGGTATCCAAGAAACGGCGGAGAATGCTTATTGCTGGGTATGATCTTGACATGTCATATATCACAGATCGATTACTAGCAATGTCATTTCCTGCAGAACGTATGCGAGCAATGTATAGAAATCCTCTCTGGCAGGTCAAATCTGTGCTGGATATGAGACACCATGACCACTATAAGATATATAATCTATGTATAGAAGAGAATTATGATCCAGCACACTTTTATGGTCGTGTGGAAGCATATCCCTTTGATGACAACCATGTACCACCTCTTGAAATGATCAAGAACTTCTGTGAAAGTGTGCATTCGTGGTTATCCAGTGACCCAAAAAATATTGCTGTCATCCATTGCATGGCAGGGAAGGGTAGAACTGGCTTGATGGTATCTTCATACCTAGTTTACTGCGGTATGTCCACAGATGAGGCTCTTCAATTGTATGCTGATAGACGGACAACCAATAACGAAGGAGTGTCAATACCAAGCCAATGTCGTTATGTAGGGTACTGGGAAAGTATACTATCTGTTCCTAGAGGCATTCGTAATGAACCAGTAACTGTGAGCTTGCCTCAACCATGTAGCAGAGAATTGCGGCGAATCCGGCTTTATGATACACTTAATGTTGAAGCGATCTTCTTTGTGATCTTAGAGATGCAGAAGGTTCCTAATCAAGTCTACTGTCCATCAGTGGAGATTATTCGGAGCAGCTGCAGACGAATTAAGAAAGGATATCAGCAAAACTACAGTCCTTGCTATTATCTCTCTTATGTAGAAGGTGATGAAGATGGAAAAGAATCAAAATTAGAGGAAGCTCGTGTTGTAGTCCAAATGGACACTGAGGATCCGGCAATATACCAAAAATCTTGTCTGGACCATTACTTTGACAAACCAGTCCAACTTACTGGAGATGTTCGTGTCATATTCTATCAAAAAATGATGGGAAGCCGACTTTTCTACTGCTGTTTTAATACAGCTTTTATTAGGAATGGCTTGCTACAGCTGAGGATGAAGGACTTGGACAAAGTAGGGAATAAAGGAAGATCAATCTGTGGGCCATGCTTCTGCTTAGAATTTCTGTTTGGCCCAGCCAACATGAAACACTCGGCAACTCCATCTAATGAGGATTCTGAGGATGAATATCCTTAA 1245 0.4096 MGLKHTKEGPPKVENLSLHHHLINYLAENLYIRNLVSKKRRRMLIAGYDLDMSYITDRLLAMSFPAERMRAMYRNPLWQVKSVLDMRHHDHYKIYNLCIEENYDPAHFYGRVEAYPFDDNHVPPLEMIKNFCESVHSWLSSDPKNIAVIHCMAGKGRTGLMVSSYLVYCGMSTDEALQLYADRRTTNNEGVSIPSQCRYVGYWESILSVPRGIRNEPVTVSLPQPCSRELRRIRLYDTLNVEAIFFVILEMQKVPNQVYCPSVEIIRSSCRRIKKGYQQNYSPCYYLSYVEGDEDGKESKLEEARVVVQMDTEDPAIYQKSCLDHYFDKPVQLTGDVRVIFYQKMMGSRLFYCCFNTAFIRNGLLQLRMKDLDKVGNKGRSICGPCFCLEFLFGPANMKHSATPSNEDSEDEYP 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral871g00081 414 CDD PTP_PTEN 51 204 IPR045101 GO:0016791
Pral871g00081 414 ProSiteProfiles C2 tensin-type domain profile. 241 396 IPR014020 -
Pral871g00081 414 ProSitePatterns Tyrosine specific protein phosphatases active site. 149 159 IPR016130 GO:0016311|GO:0016791
Pral871g00081 414 Pfam C2 domain of PTEN tumour-suppressor protein 312 393 IPR014020 -
Pral871g00081 414 ProSiteProfiles Phosphatase tensin-type domain profile. 41 210 IPR029023 -
Pral871g00081 414 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 207 IPR029021 -
Pral871g00081 414 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 317 395 IPR035892 -
Pral871g00081 414 Gene3D - 284 397 - -
Pral871g00081 414 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 31 410 - -
Pral871g00081 414 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN 28 210 - -
Pral871g00081 414 SMART PTEN_C2_2 223 395 IPR014020 -
Pral871g00081 414 Gene3D Protein tyrosine phosphatase superfamily 28 209 IPR029021 -
Pral871g00081 414 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 129 184 IPR000387 GO:0016311|GO:0016791
Pral871g00081 414 Pfam Tyrosine phosphatase family 143 181 IPR026893 GO:0004721
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral871g00081 Pral-Chr871 634413 639521 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral871g00081 1 408 Protein tyrosine phosphatase (PTP) family AT5G39400 65.617 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral871g00081 K01110 - qsa:O6P43_004433 668.307