Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral871g00080 ATGGGGTTGAAACATACAAAGGAGGGGCCACCCAAAGTTGAAAACCTGAGTTTACATCATCACTTGATCAATTACCTCGCAGAAAATTTATATATTCGTAATTTGGTATCCAAGAAACGGCGGAGAATGCTTATTGCTGGGTATGATCTTGACATGTCATATATCACAGATCGATTACTAGCAATGTCATTTCCTGCAGAACGTATGCGAGCAATGTATAGAAATCCTCTCTGGCAGGTCAAATCTGTGCTGGATATGAGACACCATGACCACTATAAGATATATAATCTATGTATAGAAGAGAATTATGATCCAGCACACTTTTATGGTCGTGTGGAAGCATATCCCTTTGATGACAACCATGTACCACCTCTTGAAATGATCAAGAACTTCTGTGAAAGTGTGCATTCGTGGTTATCCAGTGACCCAAAAAATATTGCTGTCATCCATTGCATGGCAGGGAAGGGTAGAACTGGCTTGATGGTATCTTCATACCTAGTTTACTGCGGTATGTCCACAGATGAGGCTCTTCAATTGTATGCTGATAGACGGACAACCAATAACGAAGGAGTTCCTAATCAAGTCTACTGTCCATCAGTGGAGATTATTCGGAGCAGCTGCAGACGAATTAAGAAAGGATATCAGCAAAACTACAGTCCTTGCTATTATCTCTCTTATGTAGAAGGTGATGAAGATGGAAAAGAATCAAAATTAGAGGAAGCTCGTGTTGTAGTCCAAATGGACACTGAGGATCCGGCAATATACCAAAAATCTTGTCTGGACCATTACTTTGACAAACCAGTCCAACTTACTGGAGATGTTCGTGTCATATTCTATCAAAAAATGATGGGAAGCCGACTTTTCTACTGCTGTTTTAATACAGCTTTTATTAGGAATGGCTTGCTACAGCTGAGGATGAAGGACTTGGACAAAGTAGGGAATAAAGGAAGATCAATCTGTGGGCCATGCTTCTGCTTAGAATTTCTGTTTGGCCCAGCCAACATGAAACACTCGGCAACTCCATCTAATGAGGATTCTGAGGATGAATATCCTTAA 1056 0.4062 MGLKHTKEGPPKVENLSLHHHLINYLAENLYIRNLVSKKRRRMLIAGYDLDMSYITDRLLAMSFPAERMRAMYRNPLWQVKSVLDMRHHDHYKIYNLCIEENYDPAHFYGRVEAYPFDDNHVPPLEMIKNFCESVHSWLSSDPKNIAVIHCMAGKGRTGLMVSSYLVYCGMSTDEALQLYADRRTTNNEGVPNQVYCPSVEIIRSSCRRIKKGYQQNYSPCYYLSYVEGDEDGKESKLEEARVVVQMDTEDPAIYQKSCLDHYFDKPVQLTGDVRVIFYQKMMGSRLFYCCFNTAFIRNGLLQLRMKDLDKVGNKGRSICGPCFCLEFLFGPANMKHSATPSNEDSEDEYP 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral871g00080 351 SMART PTEN_C2_2 192 332 IPR014020 -
Pral871g00080 351 ProSiteProfiles C2 tensin-type domain profile. 178 333 IPR014020 -
Pral871g00080 351 Pfam Tyrosine phosphatase family 143 181 IPR026893 GO:0004721
Pral871g00080 351 ProSitePatterns Tyrosine specific protein phosphatases active site. 149 159 IPR016130 GO:0016311|GO:0016791
Pral871g00080 351 Gene3D Protein tyrosine phosphatase superfamily 28 212 IPR029021 -
Pral871g00080 351 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 254 332 IPR035892 -
Pral871g00080 351 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 206 347 - -
Pral871g00080 351 Pfam C2 domain of PTEN tumour-suppressor protein 249 330 IPR014020 -
Pral871g00080 351 Gene3D - 223 335 - -
Pral871g00080 351 ProSiteProfiles Phosphatase tensin-type domain profile. 41 207 IPR029023 -
Pral871g00080 351 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 196 IPR029021 -
Pral871g00080 351 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 129 184 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral871g00080 Pral-Chr871 634413 639521 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral871g00080 1 345 Protein tyrosine phosphatase (PTP) family AT5G39400 56.829 1.82e-155 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral871g00080 K01110 - qsa:O6P43_004433 513.842