Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral871g00059 ATGGATGGTTCAACTGGCCGTGCCAGCAGTGCAGATGTATTTTTACCAAATTATAAGTTGGGAAAAACACTTGGGATTGGATCCTTTAGCAAGGTGAAAATTGCAGAGCATATATTGACTGGCCATAAAGTTGCCATTAAGATCCTTAATCGGCGCAAGATAAAGAACATGGAAATGGAAGAAAAAGTGAGAAGAGAAATCAAAATTTTAAGATTGTTCATGCACCCACACGTCATACGACTTTACGAGGTCATAGAAACCCCAACAGACATATATGTTGTCATGGAGTATGTAAAATCTGGTGAACTCTTTGATTACATTGTGGAAAAGGGTAGGCTACAAGAAGATGAAGCCCGTAATTTTTTCCAGCAGATAATCTCTGGCGTGGAGTACTGTCACAGAAATATGGTGGCTCATAGAGACCTTAAGCCAGAAAATTTACTTTTGGACGCCAAATGCAATGTCAAAATTGCTGATTTTGGTTTGAGCAATATCATGCGCGATGGTCACTTTCTTAAGACAAGTTGTGGAAGCCCAAACTATGCTGCTCCGGAGGTTATATCTGGAAAGTTGTATGCTGGACCTGAAGTAGATGTCTGGAGCTGTGGTGTAATTTTATACGCTCTTCTCTGTGGTACCCTTCCTTTTGATGATGAAAACATTCCTAACCTTTTTAAGAAAATAAAGGGTGGGATATATACTCTTCCTAGTCATCTATCACCTGGTGCTAGAGATCTGATCCCAAGGATGCTTGTGGTTGATCCCATGAAGAGAATGACCATACCTGAGATTCGCCAACACCCATGGTTCCAGGCTCACCTCCCTCGTTATTTAGCTGTGCCCCCACCAGATACAATGCAGCAAGCGAAAAAGATTGACGAGGAACTTCTTCAGGAAGTGGTTAACATGGGATTTGATAGGAATCAACTGGTTGAATCTCTTCAGAACCGGATACAAAATGAGGGTACTGTAGCATACTATTTGTTATTGGACAATCGGTTCCGTGTTTCCAGTGGCTATCTTGGAGCTGAATTCCAAGAGACAATGGATTCTGGTTTTAACCGTATTCATCCCAGTGGAGTTGCTGCTTCAGTTGTTGGTCACCGCCTTCCAGGGTTTATGGACTATCCAGGAGCAGCATTAAGACCCCAGTTCCCTGTTGAGAGAAAATGGGCCCTTGGGCTTCAGTCTCGTGCTCATCCTCGTGAAATAATGACTGAGGTCCTTAAAGCCCTGCAAGAATTAAATGTGTGTTGGAAAAAGATTGGACCTTACAACATGAAGTGCAGATGGGTTGCTGGGAATCCTGGTCATGACGGAATGGTAGACAATACTGTGTATGGCAGTCATTACTACAGAGATGATGCCACCATCATTGAGAACGATTCTGTTTCTAAGCCAAATGTGATCAAGTTTGAACTTCAGCTTTACAAAACCCGGGAGGAGAAATATCTGCTTGATCTGCAAAGGGTCCTGGGTCCACAATTTCTCTTTTTGGATCTTTGTGCTGCTTTCCTTGCACAGCTTCGCGTGCTCTAA 1539 0.4282 MDGSTGRASSADVFLPNYKLGKTLGIGSFSKVKIAEHILTGHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHVIRLYEVIETPTDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVAHRDLKPENLLLDAKCNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRMTIPEIRQHPWFQAHLPRYLAVPPPDTMQQAKKIDEELLQEVVNMGFDRNQLVESLQNRIQNEGTVAYYLLLDNRFRVSSGYLGAEFQETMDSGFNRIHPSGVAASVVGHRLPGFMDYPGAALRPQFPVERKWALGLQSRAHPREIMTEVLKALQELNVCWKKIGPYNMKCRWVAGNPGHDGMVDNTVYGSHYYRDDATIIENDSVSKPNVIKFELQLYKTREEKYLLDLQRVLGPQFLFLDLCAAFLAQLRVL 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral871g00059 512 SUPERFAMILY KA1-like 327 511 IPR028375 -
Pral871g00059 512 SMART serkin_6 18 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral871g00059 512 Gene3D Transferase(Phosphotransferase) domain 1 9 348 - -
Pral871g00059 512 Gene3D Kinase associated domain 1, KA1 394 510 - -
Pral871g00059 512 CDD UBA_SnRK1_plant 292 332 - -
Pral871g00059 512 Pfam Protein kinase domain 18 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral871g00059 512 CDD STKc_AMPK_alpha 15 270 - -
Pral871g00059 512 SMART uba_6 293 330 IPR015940 -
Pral871g00059 512 Pfam UBA/TS-N domain 292 328 IPR015940 -
Pral871g00059 512 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Pral871g00059 512 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 463 511 IPR001772 -
Pral871g00059 512 ProSiteProfiles Protein kinase domain profile. 18 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral871g00059 512 CDD AMPKA_C 388 509 - -
Pral871g00059 512 PANTHER SERINE/THREONINE KINASE 17 335 - -
Pral871g00059 512 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 291 331 IPR015940 -
Pral871g00059 512 SUPERFAMILY Protein kinase-like (PK-like) 14 289 IPR011009 -
Pral871g00059 512 SUPERFAMILY UBA-like 280 329 IPR009060 GO:0005515
Pral871g00059 512 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Pral871g00059 512 Pfam Kinase associated domain 1 469 511 IPR001772 -
Pral871g00059 512 FunFam Non-specific serine/threonine protein kinase 3 99 - -
Pral871g00059 512 FunFam Non-specific serine/threonine protein kinase 9 348 - -
Pral871g00059 512 FunFam Non-specific serine/threonine protein kinase 394 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral871g00059 Pral-Chr871 461939 466887 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral871g00059 18 270 CBL-interacting serine-threonine protein kinases AT4G24400 52.756 2.09e-93 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Pral871g00059 Pkinase 3.7e-79 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral871g00059 K07198 - gmx:100796687 935.25