Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral871g00057 ATGGGCAAAAGTACAGTTTTTTCTGGCTTGCGTGGGCGCACTGCAACCTGGCGAAAGTTGAAGAATTTGAGAATGGATGGTTCAACTGGCCGTGCCAGCAGTGCAGATGTATTTTTACCAAATTATAAGTTGGGAAAAACACTTGGGATTGGATCCTTTAGCAAGGTGAAAATTGCAGAGCATATATTGACTGGCCATAAAGTTGCCATTAAGATCCTTAATCGGCGCAAGATAAAGAACATGGAAATGGAAGAAAAAGTGAGAAGAGAAATCAAAATTTTAAGATTGTTCATGCACCCACACGTCATACGACTTTACGAGGTCATAGAAACCCCAACAGACATATATGTTGTCATGGAGTATGTAAAATCTGGTGAACTCTTTGATTACATTGTGGAAAAGGGTAGGCTACAAGAAGATGAAGCCCGTAATTTTTTCCAGCAGATAATCTCTGGCGTGGAGTACTGTCACAGAAATATGGTGGCTCATAGAGACCTTAAGCCAGAAAATTTACTTTTGGACGCCAAATGCAATGTCAAAATTGCTGATTTTGGTTTGAGCAATATCATGCGCGATGGTCACTTTCTTAAGACAAGTTGTGGAAGCCCAAACTATGCTGCTCCGGAGGTTATATCTGGAAAGTTGTATGCTGGACCTGAAGTAGATGTCTGGAGCTGTGGTGTAATTTTATACGCTCTTCTCTGTGGTACCCTTCCTTTTGATGATGAAAACATTCCTAACCTTTTTAAGAAAATAAAGGGTGGGATATATACTCTTCCTAGTCATCTATCACCTGGTGCTAGAGATCTGATCCCAAGGATGCTTGTGGTTGATCCCATGAAGAGAATGACCATACCTGAGATTCGCCAACACCCATGGTTCCAGGCTCACCTCCCTCGTTATTTAGCTGTGCCCCCACCAGATACAATGCAGCAAGCGAAAAAGATTGACGAGGAACTTCTTCAGGAAGTGGTTAACATGGGATTTGATAGGAATCAACTGGTTGAATCTCTTCAGAACCGGATACAAAATGAGGGTACTGTAGCATACTATTTGTTATTGGACAATCGGTTCCGTGTTTCCAGTGGCTATCTTGGAGCTGAATTCCAAGAGACAATGGATTCTGGTTTTAACCGTATTCATCCCAGTGGAGTTGCTGCTTCAGTTGTTGGTCACCGCCTTCCAGGGTTTATGGACTATCCAGGAGCAGCATTAAGACCCCAGTTCCCTGTTGAGAGAAAATGGGCCCTTGGGCTTCAGTCTCGTGCTCATCCTCGTGAAATAATGACTGAGGTCCTTAAAGCCCTGCAAGAATTAAATGTGTGTTGGAAAAAGATTGGACCTTACAACATGAAGTGCAGATGGGTTGCTGGGAATCCTGGTCATGACGGAATGGTAGACAATACTGTGTATGGCAGTCATTACTACAGAGATGATGCCACCATCATTGAGAACGATTCTGTTTCTAAGCCAAATGTGATCAAGTTTGAACTTCAGCTTTACAAAACCCGGGAGGAGAAATATCTGCTTGATCTGCAAAGGGTCCTGGGTCCACAATTTCTCTTTTTGGATCTTTGTGCTGCTTTCCTTGCACAGCTTCGCGTGCTCTAA 1611 0.4302 MGKSTVFSGLRGRTATWRKLKNLRMDGSTGRASSADVFLPNYKLGKTLGIGSFSKVKIAEHILTGHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHVIRLYEVIETPTDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVAHRDLKPENLLLDAKCNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRMTIPEIRQHPWFQAHLPRYLAVPPPDTMQQAKKIDEELLQEVVNMGFDRNQLVESLQNRIQNEGTVAYYLLLDNRFRVSSGYLGAEFQETMDSGFNRIHPSGVAASVVGHRLPGFMDYPGAALRPQFPVERKWALGLQSRAHPREIMTEVLKALQELNVCWKKIGPYNMKCRWVAGNPGHDGMVDNTVYGSHYYRDDATIIENDSVSKPNVIKFELQLYKTREEKYLLDLQRVLGPQFLFLDLCAAFLAQLRVL 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral871g00057 536 FunFam Non-specific serine/threonine protein kinase 33 372 - -
Pral871g00057 536 PANTHER SERINE/THREONINE KINASE 41 359 - -
Pral871g00057 536 ProSitePatterns Protein kinases ATP-binding region signature. 48 71 IPR017441 GO:0005524
Pral871g00057 536 SUPERFAMILY KA1-like 351 535 IPR028375 -
Pral871g00057 536 FunFam Non-specific serine/threonine protein kinase 26 123 - -
Pral871g00057 536 Pfam Kinase associated domain 1 493 535 IPR001772 -
Pral871g00057 536 ProSiteProfiles Protein kinase domain profile. 42 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral871g00057 536 SUPERFAMILY Protein kinase-like (PK-like) 38 313 IPR011009 -
Pral871g00057 536 SMART serkin_6 42 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral871g00057 536 Pfam UBA/TS-N domain 316 352 IPR015940 -
Pral871g00057 536 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 487 535 IPR001772 -
Pral871g00057 536 Gene3D Transferase(Phosphotransferase) domain 1 33 372 - -
Pral871g00057 536 SMART uba_6 317 354 IPR015940 -
Pral871g00057 536 CDD STKc_AMPK_alpha 39 294 - -
Pral871g00057 536 CDD UBA_SnRK1_plant 316 356 - -
Pral871g00057 536 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 315 355 IPR015940 -
Pral871g00057 536 SUPERFAMILY UBA-like 304 353 IPR009060 GO:0005515
Pral871g00057 536 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Pral871g00057 536 Gene3D Kinase associated domain 1, KA1 418 534 - -
Pral871g00057 536 FunFam Non-specific serine/threonine protein kinase 418 534 - -
Pral871g00057 536 Pfam Protein kinase domain 42 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral871g00057 536 CDD AMPKA_C 412 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral871g00057 Pral-Chr871 461939 471119 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral871g00057 42 294 CBL-interacting serine-threonine protein kinases AT4G24400 52.756 3.81e-93 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Pral871g00057 Pkinase 4.2e-79 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral871g00057 K07198 - gmx:100796687 935.25