Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral871g00051 ATGGAGATTCCCTCAGGAGTAAGAAAAGGCACGTGGTCTAAAGAAGAAGATGATCTTCTAAGAGCATGCATCCAACGTCACGGTGAAGGAAAATGGCGCCTAGTTCCTCAAAGAGCAGGCTTGAATAGATGCCGGAAAAGTTGTAGACTGAGGTGGATAAACTACTTAAAGCCAGACATCAAGAGAGGAAACTTCACTGAGGATGAAGCTGATATGATAATGAGGTTCCATAGACTCTTGGGAAACAGATGGTCGCTGATTGCTGCGAGGTTTCCCGGAAGAACATCAAATGACGTGAAGAATTACTGGAACACCCACATACGAAAGAAGCTGCGACGGTCTGAGGAGAAACAAGAGACGACCAGCATGATGAAAAGCCACAAAGTAATAAGGCCCCGACCTCTGACTTTGTCCAGAAACTGGTCAAGGCCGAGTAGAGAGGGATTATCTGAAGAAGGAGCTGCGAATACTTGTGATAATAATGATACTCATAAAAGTGAACAAAGTAGTTGGAGATCAGACAAGGCTATAATGGCGAGTGATGACAGTGACAGTAAGAATAGGAAGAGTGAGAGTAGTGAAGGGGCGGGTGTAGGTGGGGACTCTTCAGCGTAG 615 0.4553 MEIPSGVRKGTWSKEEDDLLRACIQRHGEGKWRLVPQRAGLNRCRKSCRLRWINYLKPDIKRGNFTEDEADMIMRFHRLLGNRWSLIAARFPGRTSNDVKNYWNTHIRKKLRRSEEKQETTSMMKSHKVIRPRPLTLSRNWSRPSREGLSEEGAANTCDNNDTHKSEQSSWRSDKAIMASDDSDSKNRKSESSEGAGVGGDSSA 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral871g00051 204 MobiDBLite consensus disorder prediction 111 126 - -
Pral871g00051 204 FunFam Myb transcription factor 9 61 - -
Pral871g00051 204 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
Pral871g00051 204 SMART sant 8 58 IPR001005 -
Pral871g00051 204 SMART sant 61 109 IPR001005 -
Pral871g00051 204 MobiDBLite consensus disorder prediction 111 204 - -
Pral871g00051 204 CDD SANT 64 107 IPR001005 -
Pral871g00051 204 SUPERFAMILY Homeodomain-like 6 103 IPR009057 -
Pral871g00051 204 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 56 IPR017930 -
Pral871g00051 204 Gene3D - 64 132 - -
Pral871g00051 204 CDD SANT 11 56 IPR001005 -
Pral871g00051 204 MobiDBLite consensus disorder prediction 165 191 - -
Pral871g00051 204 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Pral871g00051 204 Pfam Myb-like DNA-binding domain 62 106 IPR001005 -
Pral871g00051 204 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 111 IPR017930 -
Pral871g00051 204 Gene3D - 9 61 - -
Pral871g00051 204 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 185 - -
Pral871g00051 204 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral871g00051 Pral-Chr871 425785 426775 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral871g00051 2 138 MYB Transcription Factor Family AT1G66370 58.219 5.51e-58 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral871g00051 Myb_DNA-binding 1.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral871g00051 - K09422 lang:109335100 213.386