Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral871g00049 ATGGAGATTCCCTCAGGAATAAGAAAAGGCACGTGGTCTGAAGAAGAAGACGATCTTCTAAGAGCATGCATCCAACGTCACGGTGAAGGAAAATGGCGCCTAGTTCCTCAAAGAGCAGGCTTGAATAGATGCCGGAAAAGTTGTAGACTGAGGTGGGTAAACTACTTAAAGCCAGACATCAAGAGAGGAAACTTCACTGAGGATGAAGCTGATATGATAATGAGGTTCCATAGACTCCTAGGAAACAGATGGTCGCTGATTGCTGCGAGGTTTCCTGGAAGAACATCAAATGACGTGAAGAATTACTGGAACACCCACATACGAAAGAAGCTGCAACGGTCTGAGGAGAAACAAGAGGCGACCAGCATGATGAAAAGCCACAAAGTCATAAGGCCCCGACCTCTGACTTTGTCCAGAAACTGGTCAAGGCCGAGTAGAGAGGGATTATCATCTGAAGAAGGAGCTGCGAATACTTGTGATAATAACGATACTCATAAAAGTGAACAAAGTAGTTGGAGATCAGACAAGGCTATAATGGCGAGTGATGACAGTGACAGTAAGAACAGGAAGAGTGAGAGTAGTGAAGTGGCGGGGGTAGGTAGGGATTCTTCAGCAGAGAAGAAGGAGTGGTGGGAGAGTTTATTGCTTGATGACGACGTCATGAACAAAGGCAACGATGAAGACAGCTTTTGGTGTTTGAGATCAGAGGAAAACAGCAAATTCCTGGCTCAATTCTGGGACGACGACCAACCACTTGATTTCTTTTCAATATGA 774 0.4522 MEIPSGIRKGTWSEEEDDLLRACIQRHGEGKWRLVPQRAGLNRCRKSCRLRWVNYLKPDIKRGNFTEDEADMIMRFHRLLGNRWSLIAARFPGRTSNDVKNYWNTHIRKKLQRSEEKQEATSMMKSHKVIRPRPLTLSRNWSRPSREGLSSEEGAANTCDNNDTHKSEQSSWRSDKAIMASDDSDSKNRKSESSEVAGVGRDSSAEKKEWWESLLLDDDVMNKGNDEDSFWCLRSEENSKFLAQFWDDDQPLDFFSI 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral871g00049 257 MobiDBLite consensus disorder prediction 111 207 - -
Pral871g00049 257 MobiDBLite consensus disorder prediction 166 207 - -
Pral871g00049 257 MobiDBLite consensus disorder prediction 111 126 - -
Pral871g00049 257 Gene3D - 64 131 - -
Pral871g00049 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 56 IPR017930 -
Pral871g00049 257 MobiDBLite consensus disorder prediction 138 165 - -
Pral871g00049 257 CDD SANT 64 107 IPR001005 -
Pral871g00049 257 Pfam Myb-like DNA-binding domain 62 106 IPR001005 -
Pral871g00049 257 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Pral871g00049 257 CDD SANT 11 56 IPR001005 -
Pral871g00049 257 SUPERFAMILY Homeodomain-like 6 103 IPR009057 -
Pral871g00049 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 111 IPR017930 -
Pral871g00049 257 SMART sant 8 58 IPR001005 -
Pral871g00049 257 SMART sant 61 109 IPR001005 -
Pral871g00049 257 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 213 - -
Pral871g00049 257 Gene3D - 9 61 - -
Pral871g00049 257 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
Pral871g00049 257 FunFam Myb transcription factor 9 61 - -
Pral871g00049 257 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral871g00049 Pral-Chr871 396176 397308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral871g00049 2 138 MYB Transcription Factor Family AT1G66370 58.904 7.38e-58 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral871g00049 Myb_DNA-binding 1.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral871g00049 - K09422 pcin:129304058 221.09