Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral871g00037 ATGTCCTCTGATTCCGATGCCACCTCCCCCAATTCATCATCTGCGCCTCCACTGCAACTGGACGATCCCCAAATTCGAAGATTGTCTATGCTTCTCCCTCTGCTTCTCAGTTTAGCGCCCCCTCGCCAGGCCCCAGAATTTGATCCTGGTAGCCACCGTGGCCGAGTACGAATCATCGTAGTTGACCCTTCAGCGGGAGCCATGATCGTGATCGAAGGCTCCGGAGATCTCCAATCCGTGCTTCAAGGCCTATCGGTGAAGTCCGGGGCGTTGCCGGCGTCCAAGGATTCGATTCAGGCCATGCCCAGAGTGGTGGTGACCGAAGAAGGCACGGATTGTTCGATCTGCTTGGAAGCTTACGAAGTGGGGGGCGAAGCTAGGGAAATGCCGTGCAAGCATAAATTTCACTCGGGGTGTATTGAGAAGTGGTTAGGGATTCACGGGTCTTGCCCAATCTGCCGATATGCCATGCCGGCGGAGGAGGAAGACATTAGTATCGCCGGCAGCGAGGGCGAGCCAGATGGCGGCGAGAGGAGGGAGAGCGGTGAGGGTTTGGTATCCGTGAGTGTATGGGTGAGGTCCCTGGACGAAGACGATGATGATCCGATGGAAGTGGATTCAGAGTGGGATGATGGATCCGGGGGATCCAATAATGATTCGCGAGAAGAAGGAAATTCAGCAGGGGATGGGGACTCGTTGATGATGGATCAAGAGCCACAAGACATGGAATTCTGA 735 0.5524 MSSDSDATSPNSSSAPPLQLDDPQIRRLSMLLPLLLSLAPPRQAPEFDPGSHRGRVRIIVVDPSAGAMIVIEGSGDLQSVLQGLSVKSGALPASKDSIQAMPRVVVTEEGTDCSICLEAYEVGGEAREMPCKHKFHSGCIEKWLGIHGSCPICRYAMPAEEEDISIAGSEGEPDGGERRESGEGLVSVSVWVRSLDEDDDDPMEVDSEWDDGSGGSNNDSREEGNSAGDGDSLMMDQEPQDMEF 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral871g00037 244 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 83 160 IPR013083 -
Pral871g00037 244 Pfam Ring finger domain 112 154 IPR001841 -
Pral871g00037 244 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 55 158 - -
Pral871g00037 244 MobiDBLite consensus disorder prediction 166 244 - -
Pral871g00037 244 ProSiteProfiles Zinc finger RING-type profile. 113 154 IPR001841 -
Pral871g00037 244 MobiDBLite consensus disorder prediction 1 22 - -
Pral871g00037 244 SMART ring_2 113 153 IPR001841 -
Pral871g00037 244 SUPERFAMILY RING/U-box 107 158 - -
Pral871g00037 244 FunFam E3 ubiquitin-protein ligase RNF181 82 160 - -
Pral871g00037 244 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral871g00037 Pral-Chr871 316199 316933 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral871g00037 26 193 C3H Transcription Factor Family AT1G26800 41.765 2.01e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral871g00037 - K11982 ming:122075836 164.466