Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral871g00027 ATGGCGAGGAAGTGCTCACATTGTGGGAACATCGGCCACAATTCAAGGACGTGCACATCGATGAGAGGTGCTTTCGCAGGGCTTCGACTCTTCGGTGTTCAACTGGACATATCGTCTTCTTCTTGTGTTGCCATCAAGAAAAGCTTTAGCATGGACTCTCTGCCCTCTTCCTCATCTTCTTCTTCCTCTTTCTCTTCCTCCAGATTAACCATCGACGAACACTGCGATAGAACCTCCCTCGGCTATCTCTCCGACGGTCTCCTAGGTCGAGTACAAGACCGGAAAAAAGGAGTTCCCTGGACAGAAGAGGAGCACCGAGCATTCCTGGTAGGGCTGGAGAAGCTGGGAAAAGGAGACTGGCGGGGAATCTCCAGGAACTATGTCACCACCAGAACCCCTACTCAAGTTGCCAGTCATGCTCAGAAATACTTCCTTCGACTCGCCACCCTTCACAAGAAGAAGCGACGTTCCAGTCTTTTTGACATGGATTGTATATGGAAGGTTGGAAGCAGTCAAGGTCATGCTCATCCTAAGGCAGGCGATTCGGCAGAGAATATTGACACTGATTTGCAGCTTCTTGGCCGCAAGATAATGGAAGCCGACAAATCACCAGATGATAAACAAACAGAAGAAATTGCGGATGATGATTATTCTCAACGTTCTGAAACTTCACAAGGTGCCAAATTGTTGAAATCTTCCAATGGATCAGCGGCGCTTGATCTGGAGCTCACACTTGCAGCCCCCAACAACACTCTCCAGCACCAAAATACCCTTCTTGGTCCAGTCATCAGCGTCACCTGA 801 0.4906 MARKCSHCGNIGHNSRTCTSMRGAFAGLRLFGVQLDISSSSCVAIKKSFSMDSLPSSSSSSSSFSSSRLTIDEHCDRTSLGYLSDGLLGRVQDRKKGVPWTEEEHRAFLVGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKYFLRLATLHKKKRRSSLFDMDCIWKVGSSQGHAHPKAGDSAENIDTDLQLLGRKIMEADKSPDDKQTEEIADDDYSQRSETSQGAKLLKSSNGSAALDLELTLAAPNNTLQHQNTLLGPVISVT 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral871g00027 266 ProSiteProfiles Myb-like domain profile. 92 144 IPR001005 -
Pral871g00027 266 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
Pral871g00027 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 148 IPR017930 -
Pral871g00027 266 SUPERFAMILY Homeodomain-like 93 148 IPR009057 -
Pral871g00027 266 PANTHER TRANSCRIPTION FACTOR KUA1 3 202 - -
Pral871g00027 266 MobiDBLite consensus disorder prediction 198 218 - -
Pral871g00027 266 MobiDBLite consensus disorder prediction 198 228 - -
Pral871g00027 266 CDD SANT 99 144 IPR001005 -
Pral871g00027 266 ProSiteProfiles SANT domain profile. 100 148 IPR017884 -
Pral871g00027 266 NCBIfam myb-like DNA-binding domain, SHAQKYF class 95 146 IPR006447 GO:0003677
Pral871g00027 266 FunFam transcription factor MYB1R1 98 149 - -
Pral871g00027 266 SMART sant 96 146 IPR001005 -
Pral871g00027 266 Gene3D - 98 150 - -
Pral871g00027 266 Pfam Myb-like DNA-binding domain 99 144 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral871g00027 Pral-Chr871 248742 250191 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral871g00027 Myb_DNA-binding 2.5e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral871g00027 - - gmx:778093 281.182