Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral871g00010 ATGGCTCTCCCTCTATCAGTCCGCTGCCCAATCTCGACTCTTTCATCTCCACCCTCCTCACCCCTTTCCTTCGATGTGCTTCCATTTTCGTCTCCGAAATGTTTCTTATTTTCGCGACCCGTCCTCCGCCCCCTCCGCGTTGACATCCGCCGATCTTACCCCTTTGTGACGGCCACCTTCTCCACCTCTGGTGCCTTGTCCACCTCCCCTGCTAAAGGAGATAAGAAGCTGCTGCTTCAAGTCAATGATTTGAGAGCTAAGATTGTCGAATCCGACGTAGAAATTCTTCATGGGGTCAACCTCACCATCAACGAAGGAGAGGTTCATGCGATCATGGGAAAGAACGGTTCTGGAAAGAGCACTTTTGCAAAGGTTCTTGTTGGCCATCCAGATTATGAAGTCATTGGAGGCAGTGTTCTGTTCAAAGGGGGAAATCTGCTTGACATGGAACCTGAGGAAAGGGCACTTGCTGGCCTTTTTATGAGCTTCCAGTCCCCTGTTGAGATTCCTGGTGTTTCTAATTACGATTTTCTGGTTATGGCTTATAATGCTCGACAAAGAAAACTTGGCCAGCTTGAACTTGGTCCACTTGAGTTCTTGCCTTACCTAATGGAGAAAGTCAATCTTGTAAAAATGAAGGAAGACTTTTTGGATAGAAATGTAAATGAAGGATTTAGTGGTGGTGAACGGAAGCGCAATGAAATTTTGCAGCTTGCGGTTTTGGGGGCAGACTTGGCTATTTTGGATGAAATAGATTCTGGATTGGATGTTGATGCACTGAGAGACGTAGCAAATGCGGTGAATCAGATTCTGACCTCAAAAAATTCTCTGTTGATGATAACTCATTACCGACGAATTCTGGATCTCCTAAATCCTACACATGTTCACATCATGGACAGGGGAAAGATTGCAAGGACGGGTGACTTATCCATGGTTGAAGTTATTGAGGCAGAGGGATATGAGACAGTATCTGCCTAA 978 0.4581 MALPLSVRCPISTLSSPPSSPLSFDVLPFSSPKCFLFSRPVLRPLRVDIRRSYPFVTATFSTSGALSTSPAKGDKKLLLQVNDLRAKIVESDVEILHGVNLTINEGEVHAIMGKNGSGKSTFAKVLVGHPDYEVIGGSVLFKGGNLLDMEPEERALAGLFMSFQSPVEIPGVSNYDFLVMAYNARQRKLGQLELGPLEFLPYLMEKVNLVKMKEDFLDRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVANAVNQILTSKNSLLMITHYRRILDLLNPTHVHIMDRGKIARTGDLSMVEVIEAEGYETVSA 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral871g00010 325 NCBIfam Fe-S cluster assembly ATPase SufC 79 322 IPR010230 GO:0005524
Pral871g00010 325 CDD ABC_FeS_Assembly 79 320 IPR010230 GO:0005524
Pral871g00010 325 PANTHER ABC TRANSPORTER I FAMILY MEMBER 6, CHLOROPLASTIC 68 324 IPR010230 GO:0005524
Pral871g00010 325 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 79 325 IPR003439 GO:0005524
Pral871g00010 325 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 78 309 IPR027417 -
Pral871g00010 325 Pfam ABC transporter 96 250 IPR003439 GO:0005524
Pral871g00010 325 ProSitePatterns ABC transporters family signature. 225 239 IPR017871 GO:0005524|GO:0016887
Pral871g00010 325 Gene3D - 78 324 IPR027417 -
Pral871g00010 325 SMART AAA_5 105 293 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral871g00010 Pral-Chr871 140103 144098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral871g00010 92 310 Calmodulin-binding Proteins AT2G36910 23.478 1.15e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral871g00010 K09013 - gmx:100811883 427.172