Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral871g00006 ATGTCAAGAATAATTCCTGAGAAGAAGTTGGGTGCGGGACGCATGGTTGCTGTGGCAATTGAGAATAACAAGACAAGCCAGTACGCCGCAAAATGGGCAGTTGATAATCTTGTCCCCAAAGATCAATGTATCCTCCTACTCCATGTCAGACAGAGGGCATCTTCCATTCCCACGACAACCGGAAATCTTGTACCCGTCGATTCCTGCGATGACGTGGCGAGAGCATACAAGCAGCAATTCGACAACGAATCCAGGGAGCTTTTTGCCTCATTCCGTGTTTTCTTCAACAGAAAAAATGTACAATGCAAAGAAGTCTTATTGGAAGACACGGATATAGCTAAAGCATTGATAGAATGTGTTTCCACGCATTCAGTTGAGCTTCTGGTGCTTGGGGCACCATCAAGAAGTGGCATTGTGAGAAGATTTAGGACAACCGATGTCCCAAGCCTTGTGTCAAAAGGGGCGCCGCCATTCTGCACTGTGTATATCATTTCCAAAGGAAAAATCTCATCTGTACGAGCTGCTTCTGCTCCACTGCCAGCTAAACCTGCACCTCGAAACGCAGTGCAGCAACAATCCGCCCAGAGTCCTGATAGGCTGGATGCAACACTCGTTCGCAGCCTAACACCACGGTCAGAGCGTTCAGCATATGGCACCTGCCCCCAACCGGGTGATGATGACATCAAGTCGCCGTTCACAAGAGGGGGTAGATCAAGCTACAAACCATACGAGTCCTCAATCCCCGACTCTGATATATCATTTGTGAGCAGTGGAAGGCCAAGCATTGATAGGATGTCTAATTCAACGTATGATGATTTCGAACCTGGAATGGCCCCTCGGCTTTCCAACAGTTCAGATTTTGATGGCAGAAGCTCTGAGTCATCTTTCTCTGGGGCTAGGCATTCTGAGGTTAACTTTTCGTTTAGCTCGCAAGACAGTGGGGGGTCATCCTCAAGATTGTCTCTGACGGATGATATGGAAGCCGAGATGAGAAGATTGAAGCTCGAACTGAAACAAACGATGGAAATGTACAGTACAGCTTGCCAGGAAGCACTTACAGCAAGGCAGAAGGCAATGGAACTTCAACGATGGAAATTCGAAGAGCAAAAGAAATTAGAAGAGGCAAGGATGGCTGAAGAAGCAGCATTGGCACTTGCAGAGAGAGAGAGAGCAAGGTGTAGAGCTGCCCTTGAGGCAGCAGAAGCATCTAAGAAAATTGCGGAACTGGAGGCACATAAAAGATTGAATGCAGAGATGAAAGCCCTGAAAGAATCTGAGCAGAAAAAGAATACACTCGATACTTTTCCACAAGGTAGAGCCAGGTACAGAAGATACACTATTGAGGAAATCGAAGAAGCAACAAATTGTTTCGCGGACGCGCTGAAGATCGGGGAAGGAGGGTACGGACCAGTATATAGATGTGAACTAGATCTCACGCCAGTTGCAGTAAAAGTTTTAAGGCCAGATGCAGCTCAAGGAAGGTCACAGTTTCAGCAAGAGGTTGAAGTGTTGAGTTGCATTCGTCATCCAAACATGGTTCTCCTCCTTGGAGCATGCCCAGAGTATGGGTGCCTTGTGTATGAGTACATGGCTAATGGAAGTTTGGAGGACTGCCTCTTCCAGAAACGTAACTCGCCAACTCTTCCCTGGCAGTTAAGATTTCGAATAGCTGCAGAGATCACCACCGGCCTCCTTTTCCTTCATCAGACAAAACCAGAACCACTTGTTCACCGTGATTTAAAACCTGCCAACATTTTGCTTGATCGTAACTTTGTCAGCAAGATTAGTGATGTGGGGTTGGCCAGGCTTGTACCTCCTTCAGTTGCGGACAGTGTAACTCAGTACCGCATGACATCAACTGCTGGAACTTTCTGTTATATTGATCCTGAGTACCAGCAAACCGGCATGCTCGGAATCAAATCTGACGTATACTCACTGGGGATCATGCTTCTACAAATGATAACAGCAAAGCCCCCGATGGGTTTGACTCATCATGTCGGACGAGCAATAGAAAACGGGACTTTCGCCGAGATGCTTGACCCAGCTGTTGAAGACTGGCCAGTGCAGGAAACCCTACAGTTTGCCAAGCTTGCTCTGCAGTGTGCCGAAATGAGAAGAAAAGACAGACCTGATCTTAAAAAAGTGGTATTGCCTCAGCTCAATATATTAAGAGACTTTGCCGAAGATAACATGCCCATGATGATCATGTTTGGACGTAGTACAGGATTCGCCCCACATAGTAGCAACAGTTCCACAACCTCCACAGTTCAAGATATTTTGAATGATAACCAGTCACTTTCTGGAATCTCCGGGTATGAAAGCCGCTCGAGCACATCCTCGCCATTTGGACAACAACAGCGCAGCGGGCAGCCACTTCTAGCAACGTTTGAGGTTAGAAGAGATGTGTACGAGCAAAACCTTATAAGGCACTTGGAAGTTCCAAATTTCACGGACGTGCAAGAAAGGAAACTAAGGATTTTGATATTCATGCGCGATTCTAGTTATTTAGCCTAA 2514 0.467 MSRIIPEKKLGAGRMVAVAIENNKTSQYAAKWAVDNLVPKDQCILLLHVRQRASSIPTTTGNLVPVDSCDDVARAYKQQFDNESRELFASFRVFFNRKNVQCKEVLLEDTDIAKALIECVSTHSVELLVLGAPSRSGIVRRFRTTDVPSLVSKGAPPFCTVYIISKGKISSVRAASAPLPAKPAPRNAVQQQSAQSPDRLDATLVRSLTPRSERSAYGTCPQPGDDDIKSPFTRGGRSSYKPYESSIPDSDISFVSSGRPSIDRMSNSTYDDFEPGMAPRLSNSSDFDGRSSESSFSGARHSEVNFSFSSQDSGGSSSRLSLTDDMEAEMRRLKLELKQTMEMYSTACQEALTARQKAMELQRWKFEEQKKLEEARMAEEAALALAERERARCRAALEAAEASKKIAELEAHKRLNAEMKALKESEQKKNTLDTFPQGRARYRRYTIEEIEEATNCFADALKIGEGGYGPVYRCELDLTPVAVKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLEDCLFQKRNSPTLPWQLRFRIAAEITTGLLFLHQTKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSVADSVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDVYSLGIMLLQMITAKPPMGLTHHVGRAIENGTFAEMLDPAVEDWPVQETLQFAKLALQCAEMRRKDRPDLKKVVLPQLNILRDFAEDNMPMMIMFGRSTGFAPHSSNSSTTSTVQDILNDNQSLSGISGYESRSSTSSPFGQQQRSGQPLLATFEVRRDVYEQNLIRHLEVPNFTDVQERKLRILIFMRDSSYLA 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral871g00006 837 CDD STK_N 16 167 - -
Pral871g00006 837 Gene3D Phosphorylase Kinase; domain 1 419 529 - -
Pral871g00006 837 MobiDBLite consensus disorder prediction 770 789 - -
Pral871g00006 837 MobiDBLite consensus disorder prediction 284 300 - -
Pral871g00006 837 MobiDBLite consensus disorder prediction 186 216 - -
Pral871g00006 837 Pfam Protein kinase domain 461 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral871g00006 837 FunFam U-box domain-containing protein 51 530 730 - -
Pral871g00006 837 Pfam Universal stress protein family 16 142 IPR006016 -
Pral871g00006 837 Gene3D Transferase(Phosphotransferase) domain 1 530 732 - -
Pral871g00006 837 MobiDBLite consensus disorder prediction 239 268 - -
Pral871g00006 837 Coils Coil 323 343 - -
Pral871g00006 837 MobiDBLite consensus disorder prediction 177 300 - -
Pral871g00006 837 SMART serkin_6 457 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral871g00006 837 Gene3D HUPs 14 164 IPR014729 -
Pral871g00006 837 PANTHER OS02G0152300 PROTEIN 16 741 - -
Pral871g00006 837 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 147 - -
Pral871g00006 837 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 429 529 - -
Pral871g00006 837 SUPERFAMILY Protein kinase-like (PK-like) 436 716 IPR011009 -
Pral871g00006 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 575 587 IPR008271 GO:0004672|GO:0006468
Pral871g00006 837 ProSiteProfiles Protein kinase domain profile. 457 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral871g00006 837 Coils Coil 369 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral871g00006 Pral-Chr871 97991 102190 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral871g00006 7 751 Receptor kinase-like Gene Family AT1G78940 55.007 0.0 746
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pral871g00006 Pkinase 3.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral871g00006 - - pcin:129284956 1249.96