Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral871g00003 ATGGCACTTCGTTATCCTTGGTTGCCGATAATTCTATTCCTTCTTCTTGTATATGTTGTTCCCTCTTCCTCTGGGGATTCTGTCTCGGAAGGGCTCCTCAAGTTTAGGGACTCCCTAGAGAACAACAATGCACTATCCAGTTGGAACCAATCCTCCCCTCCTTGTGTTGGTGCCAAAGCCAATTGGGTTGGCCTTCTTTGTGCCGACGGCAAAGTTTGGGGTTTGAAACTTGAGAAAATGGGGCTCAAGGGGGTCATCAATGTGGAACCCCTTCGAGGCCTCCCAGATCTCCGAACCATAAGCCTAATGGGCAACGATTTTGATTCCACCTCTTGGCCTGAATTCCACAAGCTTGTTGCCCTCAAGACCCTCTACCTTTCCGATAACAAGTTTTCAGGCATCATTCCTGATGATGCCTTTCAACGTATGGTGTGGCTCAAGAAAATTCATTTGTCAAACAATCAGTTTACTGGTCCTATCCCAATTTCACTGTCTTTATTACCTAAGCTTAGGGAGTTGAGGCTCGAGAACAACAAGTTCCAAGGCCACATTCCAGACTTTAATCAACCTACCTTAAGCTCATTTAACATAGCTAACAATCAGTTGGAGGGTGCAATTCCAATCAGCCTCAGTAAAATGCCAGCCTCTTCTTTTTCTGGTAATGAGGGGCTATGTGGAGCCCCATTGGGTGCATGCAAATCGTCCAGCTCAAAGCAAGGCGCCTCAATCGGGAGCATTGTGGTGGTAGCCATAGTCGTAGGAGTGGCAGTGATTGTGATAATAGGAGTAATGTTGATGGTCCTTGGAAGAAAAACAAAGCAAGGGACAGTGGAGAATCCAACAACATCAGGCTCTCAAAACAAAGCAGGAAGCAATGAAGTAGACGATGGGAGTAGTCATCACTCAGTATCATCACAAGCCTCTACTAGGTCTGGCAAAAGAGCAGCAGATAACCTGAAGTTGTCGTTTGTGAGAGACGATAGAGAGAGGTTTGATTTACAGGAATTGTTGAAAGCATCAGCAGAGGTATTAGGGAGTGGTTGCTTCAGTTCCTCCTATAAAGCTGCTTTGTCTAGTGGTGCAATGATTGTGGTCAAGAGATTCAAGCAAATGAACAATGTGGGAAGGGATGAGTTCCACGAGCACATGAGAAGGATTGGAAGGCTATCGCATCCTAACTTGCTCCCTCTGGTGGCTTACTATTATCGAAAGGAGGAGAAGCTTTTGGTTACTGACTATGTCAAGCATGGCAGCTTGGCCGTTCGCCTCCATGGACACCAAGGGCTAGGGCAACCATGCTTAGACTGGCCAACAAGGTTAAAGATCGTTAAGGGCATATCAAAAGGTCTAGAATATCTGTACAAGGAGATGCCAAGCCTGATAGCACCCCACGGCCATTTAAAATCCTCAAACGTGCTCCTGGGGGAATCCTTTGAGCCCCTGCTTAATGACTATGGGTTGGTCCCTGTGATAAACCAGGAGCTTGCTCAGGACACCATGGTGATATACAAATCTCCAGAGTATCTCCAAAATGGGAGGGTCACTAAGAAAACTGATGTATGGAGTCTTGGAATACTCATTCTTGAGCTTTTAACTGGCAAGTTCCCTTCCAGCTTTCTACAACAAGGCAAAGGAAGTGAAGTGGGCTTGGCTAATTGGGTGCATTCTGTTGTCCCAGAAGAGTGGAATAGTGAGGTGTTTGACAGAGAAATGGGAGACACCTCAGCCAGTCAAGTCCAAATGGCCAAACTATTAAAGATTGCTTTGGATTGTTGTGAAGGGGATGTCGACAAGAGATTAGATCTTAAAGAAGCTATTGAGAAAATTCATTCGGTCAAGGAGACCGACTAA 1851 0.4576 MALRYPWLPIILFLLLVYVVPSSSGDSVSEGLLKFRDSLENNNALSSWNQSSPPCVGAKANWVGLLCADGKVWGLKLEKMGLKGVINVEPLRGLPDLRTISLMGNDFDSTSWPEFHKLVALKTLYLSDNKFSGIIPDDAFQRMVWLKKIHLSNNQFTGPIPISLSLLPKLRELRLENNKFQGHIPDFNQPTLSSFNIANNQLEGAIPISLSKMPASSFSGNEGLCGAPLGACKSSSSKQGASIGSIVVVAIVVGVAVIVIIGVMLMVLGRKTKQEXTVENPTTSGSQNKAGSNEVDDGSSHHSVSSQASTRSGKRAADNLKLSFVRDDRERFDLQELLKASAEVLGSGCFSSSYKAALSSGAMIVVKRFKQMNNVGRDEFHEHMRRIGRLSHPNLLPLVAYYYRKEEKLLVTDYVKHGSLAVRLHGHQGLGQPCLDWPTRLKIVKGISKGLEYLYKEMPSLIAPHGHLKSSNVLLGESFEPLLNDYGLVPVINQELAQDTMVIYKSPEYLQNGRVTKKTDVWSLGILILELLTGKFPSSFLQQGKGSEVGLANWVHSVVPEEWNSEVFDREMGDTSASQVQMAKLLKIALDCCEGDVDKRLDLKEAIEKIHSVKETD 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral871g00003 617 FunFam Pollen receptor-like kinase 1 415 617 - -
Pral871g00003 617 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 88 184 - -
Pral871g00003 617 Gene3D Ribonuclease Inhibitor 27 189 IPR032675 -
Pral871g00003 617 Gene3D Ribonuclease Inhibitor 191 232 IPR032675 -
Pral871g00003 617 ProSiteProfiles Protein kinase domain profile. 339 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral871g00003 617 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 615 IPR046959 -
Pral871g00003 617 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Pral871g00003 617 MobiDBLite consensus disorder prediction 277 312 - -
Pral871g00003 617 Pfam Leucine rich repeat 135 180 IPR001611 GO:0005515
Pral871g00003 617 SUPERFAMILY Protein kinase-like (PK-like) 343 610 IPR011009 -
Pral871g00003 617 Gene3D Transferase(Phosphotransferase) domain 1 415 616 - -
Pral871g00003 617 FunFam pollen receptor-like kinase 1 308 414 - -
Pral871g00003 617 SUPERFAMILY L domain-like 52 214 - -
Pral871g00003 617 Pfam Protein kinase domain 343 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral871g00003 617 Gene3D Phosphorylase Kinase; domain 1 303 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral871g00003 Pral-Chr871 28611 33188 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral871g00003 10 617 Receptor kinase-like Gene Family AT5G35390 53.429 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral871g00003 Pkinase 1.6e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral871g00003 - - qsa:O6P43_003880 754.592