Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral866g00002 | ATGCGGGTTGTTTATGTTAGCATGAATAAATATGATGAAGTTGTACATTCTTTGGGTGATTATTATGATGTTATACATCCTTCATCGATTACTGATACATTCTCTGCCGAAATATTTCTTGCATTATCAGATGGCAAGACTGATGAAGAACATCAGCAAACACAATTTCCTGTTCCCAGCGTGCCTTCAACAGTAAATGAAGTTTTTGCCCAACCATCACAGTTGGAGCTTGTTGGCCCCTCAATGGCATGTGCCCCTTACCCATATTCAGGTCCCAATTATGCAGGAGTGACCTCAAGTTATGGACCTCAGCCTCTGGTGCATTCTCATGGTATAGGAGTTCATACCACGCAAATGGTCTTACCGCTGGAAATTGCAGAGGAGCCTGTTTACGTTAATGCGAAGCAGTACCATGGAATTCTGAGGCGTAGGCGATTACGTGCCAAAGCAGAGCTGGAAAAGAAGCTAATTAAAGGAAGGAAGCCTTACCTTCACGAGTCTCGACATTTGCATGCAATGAGAAGGGCCAGAGGATGTGGCGGCCGTTTCCTGAACACAAAGAAGCTCGATAATGATGCAACTTCTGCGAAATCCACAACAAACAATGAGGATGCTGCTACTTATGACCTTAATAATTCCTTTTCTACTGATTCAAAGTCAACGTCTCCCGATAAAAACAAGCACTGCTCACACGTTCAGGGATTTGATCTTGAAGGTGACTTCTCAGCACAGAAGTCTGAAACGCTCAACCACAGTATGAGGCCTGGCAGAGTCCTCACCATTAATTAA | 789 | 0.4373 | MRVVYVSMNKYDEVVHSLGDYYDVIHPSSITDTFSAEIFLALSDGKTDEEHQQTQFPVPSVPSTVNEVFAQPSQLELVGPSMACAPYPYSGPNYAGVTSSYGPQPLVHSHGIGVHTTQMVLPLEIAEEPVYVNAKQYHGILRRRRLRAKAELEKKLIKGRKPYLHESRHLHAMRRARGCGGRFLNTKKLDNDATSAKSTTNNEDAATYDLNNSFSTDSKSTSPDKNKHCSHVQGFDLEGDFSAQKSETLNHSMRPGRVLTIN | 262 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral866g00002 | 262 | MobiDBLite | consensus disorder prediction | 193 | 231 | - | - | |
Pral866g00002 | 262 | MobiDBLite | consensus disorder prediction | 193 | 220 | - | - | |
Pral866g00002 | 262 | PRINTS | CCAAT-binding transcription factor subunit B signature | 129 | 151 | IPR001289 | GO:0003700|GO:0006355 | |
Pral866g00002 | 262 | PRINTS | CCAAT-binding transcription factor subunit B signature | 160 | 183 | IPR001289 | GO:0003700|GO:0006355 | |
Pral866g00002 | 262 | Gene3D | - | 126 | 187 | - | - | |
Pral866g00002 | 262 | PANTHER | TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED | 45 | 243 | IPR001289 | GO:0003700|GO:0006355 | |
Pral866g00002 | 262 | ProSiteProfiles | NF-YA/HAP2 family profile. | 126 | 186 | IPR001289 | GO:0003700|GO:0006355 | |
Pral866g00002 | 262 | Pfam | CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B | 128 | 183 | IPR001289 | GO:0003700|GO:0006355 | |
Pral866g00002 | 262 | ProSitePatterns | NF-YA/HAP2 subunit signature. | 131 | 151 | IPR018362 | GO:0003677|GO:0016602 | |
Pral866g00002 | 262 | SMART | cbf3 | 125 | 186 | IPR001289 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral866g00002 | Pral-Chr866 | 9663 | 12858 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral866g00002 | 41 | 221 | CCAAT-HAP2 Transcription Factor Family | AT5G12840 | 43.646 | 2.19e-42 | 144 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NF-YA | Pral866g00002 | CBFB_NFYA | 8e-26 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral866g00002 | K08064 | - | tcc:18598988 | 210.305 |