Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral866g00002 ATGCGGGTTGTTTATGTTAGCATGAATAAATATGATGAAGTTGTACATTCTTTGGGTGATTATTATGATGTTATACATCCTTCATCGATTACTGATACATTCTCTGCCGAAATATTTCTTGCATTATCAGATGGCAAGACTGATGAAGAACATCAGCAAACACAATTTCCTGTTCCCAGCGTGCCTTCAACAGTAAATGAAGTTTTTGCCCAACCATCACAGTTGGAGCTTGTTGGCCCCTCAATGGCATGTGCCCCTTACCCATATTCAGGTCCCAATTATGCAGGAGTGACCTCAAGTTATGGACCTCAGCCTCTGGTGCATTCTCATGGTATAGGAGTTCATACCACGCAAATGGTCTTACCGCTGGAAATTGCAGAGGAGCCTGTTTACGTTAATGCGAAGCAGTACCATGGAATTCTGAGGCGTAGGCGATTACGTGCCAAAGCAGAGCTGGAAAAGAAGCTAATTAAAGGAAGGAAGCCTTACCTTCACGAGTCTCGACATTTGCATGCAATGAGAAGGGCCAGAGGATGTGGCGGCCGTTTCCTGAACACAAAGAAGCTCGATAATGATGCAACTTCTGCGAAATCCACAACAAACAATGAGGATGCTGCTACTTATGACCTTAATAATTCCTTTTCTACTGATTCAAAGTCAACGTCTCCCGATAAAAACAAGCACTGCTCACACGTTCAGGGATTTGATCTTGAAGGTGACTTCTCAGCACAGAAGTCTGAAACGCTCAACCACAGTATGAGGCCTGGCAGAGTCCTCACCATTAATTAA 789 0.4373 MRVVYVSMNKYDEVVHSLGDYYDVIHPSSITDTFSAEIFLALSDGKTDEEHQQTQFPVPSVPSTVNEVFAQPSQLELVGPSMACAPYPYSGPNYAGVTSSYGPQPLVHSHGIGVHTTQMVLPLEIAEEPVYVNAKQYHGILRRRRLRAKAELEKKLIKGRKPYLHESRHLHAMRRARGCGGRFLNTKKLDNDATSAKSTTNNEDAATYDLNNSFSTDSKSTSPDKNKHCSHVQGFDLEGDFSAQKSETLNHSMRPGRVLTIN 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral866g00002 262 MobiDBLite consensus disorder prediction 193 231 - -
Pral866g00002 262 MobiDBLite consensus disorder prediction 193 220 - -
Pral866g00002 262 PRINTS CCAAT-binding transcription factor subunit B signature 129 151 IPR001289 GO:0003700|GO:0006355
Pral866g00002 262 PRINTS CCAAT-binding transcription factor subunit B signature 160 183 IPR001289 GO:0003700|GO:0006355
Pral866g00002 262 Gene3D - 126 187 - -
Pral866g00002 262 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 45 243 IPR001289 GO:0003700|GO:0006355
Pral866g00002 262 ProSiteProfiles NF-YA/HAP2 family profile. 126 186 IPR001289 GO:0003700|GO:0006355
Pral866g00002 262 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 128 183 IPR001289 GO:0003700|GO:0006355
Pral866g00002 262 ProSitePatterns NF-YA/HAP2 subunit signature. 131 151 IPR018362 GO:0003677|GO:0016602
Pral866g00002 262 SMART cbf3 125 186 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral866g00002 Pral-Chr866 9663 12858 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral866g00002 41 221 CCAAT-HAP2 Transcription Factor Family AT5G12840 43.646 2.19e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Pral866g00002 CBFB_NFYA 8e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral866g00002 K08064 - tcc:18598988 210.305