Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral865g00008 ATGGCTTCTTCTTCCTCTGATCCTCCTGCCAAGCCCGAGCTTGGCTGTGCCATGCCAGAGACTTCGGAAGCAGCCATCAACAACGATCAGGTGTTTTCATACAGGGATTTCAAGAAGCCGAAGAAAGAGAGAGGATGTACGGCCAAAGAGAGAATCAGCAAAATGCCCCCTTGTACTGCCGGCAAACGCAGCTCCATATATCGTGGTGTAACCAGGCATAGATGGACAGGTCGTTATGAAGCACATCTTTGGGATAAGAGCACGTGGTGGAACCAAAATCGAACAGAACAAGAAGGAAAGCAAGTTTACTTGGGCGCGTATGATGATGAAGAGGCTGCGGCTAGAGCTTATGACCTTGCTGCTCTAAAATATTGGGGTCCAGGGACTCTTATTAATTTTCCAGTGTCTGATTATACAAGAGATCTTGAGAAATGCAGAATTTTTTCGAGAGAAGAATACCTAGCGTCTTTACGACGGAAGAGCAGTGGCTTTTCTAGAGGAATCTCAAAATATCGTGGACTCTCCAGTCGATGGGAGCCATCATATGGTCGCATGGCTGGATCTGACTACTTCAATAGCATACATTATGGTACAGGCGACGACTCAGCTGCAGAAAGTGAATATTTAAGTGGTTTCGGTGTGGACAGAAAAACTGATTTAACGAGTTACATTAAATGGTGGGGATCTAATAAGAGTCGCCAAGCTGATACTGGAACAAAATTATCAGAAGAAAAAAACCGTAGTTTTGCTGGAGGAGACCATGGCAGTGAGCTCAGAACATTGGAACAGCAAACACGACCTACTGAACCATATCAGATGCCACGGTTAGGCACGTCCCATGATGAAAAAAGGCATAAAAATCCTTCAGTTTCTGCTTTAAGTATCTTGTCTCGATCAGCTGCCTACAAGAGCTTGCTAGAGAACGCATCAAAGAGAGAGGGAAATAGCACTGACCCTAATGAAAATGAAAACAAAAATGGCATTGATAAGTTGGACCGTGGCAAGGCTGTGGAGAAATCATCAAATCATGATGGCGGCAATGAAGGACCTGAATCTGTAATGGGGATGAGTGGGGCTTTGTCTCTTCAAAAGAATGTTTACAACCCACTGGCTCCATTCTTGTCTGCACCCCTTTTGACTGCTTGTAGTACTATCGATCCCTTAGTAGATCCTCTTCTCTGGACGTCTCTTGCTCCTATGCTTCCTGCTGGCCTTCCCCGTAATGCTGAGGTTACAAAGACTGAGGCCAGTTCATCTTATAGCGTCTTCCAGCCGGAGGACTGA 1284 0.4548 MASSSSDPPAKPELGCAMPETSEAAINNDQVFSYRDFKKPKKERGCTAKERISKMPPCTAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWWNQNRTEQEGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVSDYTRDLEKCRIFSREEYLASLRRKSSGFSRGISKYRGLSSRWEPSYGRMAGSDYFNSIHYGTGDDSAAESEYLSGFGVDRKTDLTSYIKWWGSNKSRQADTGTKLSEEKNRSFAGGDHGSELRTLEQQTRPTEPYQMPRLGTSHDEKRHKNPSVSALSILSRSAAYKSLLENASKREGNSTDPNENENKNGIDKLDRGKAVEKSSNHDGGNEGPESVMGMSGALSLQKNVYNPLAPFLSAPLLTACSTIDPLVDPLLWTSLAPMLPAGLPRNAEVTKTEASSSYSVFQPED 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral865g00008 427 SUPERFAMILY DNA-binding domain 65 136 IPR016177 GO:0003677
Pral865g00008 427 Gene3D AP2/ERF domain 66 136 IPR036955 GO:0003700|GO:0006355
Pral865g00008 427 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 36 312 - -
Pral865g00008 427 MobiDBLite consensus disorder prediction 233 293 - -
Pral865g00008 427 SMART rav1_2 66 140 IPR001471 GO:0003700|GO:0006355
Pral865g00008 427 MobiDBLite consensus disorder prediction 237 252 - -
Pral865g00008 427 MobiDBLite consensus disorder prediction 308 355 - -
Pral865g00008 427 MobiDBLite consensus disorder prediction 314 345 - -
Pral865g00008 427 FunFam AP2-like ethylene-responsive transcription factor 65 136 - -
Pral865g00008 427 Pfam AP2 domain 66 126 IPR001471 GO:0003700|GO:0006355
Pral865g00008 427 PRINTS Ethylene responsive element binding protein signature 116 136 IPR001471 GO:0003700|GO:0006355
Pral865g00008 427 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Pral865g00008 427 ProSiteProfiles AP2/ERF domain profile. 66 134 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral865g00008 Pral-Chr865 50415 54580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral865g00008 28 411 AP2-EREBP Transcription Factor Family AT2G41710 59.591 2.38e-142 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral865g00008 AP2 2.4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral865g00008 K09285 - qsa:O6P43_034512 613.994