Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pral865g00005 | ATGGAGGATTGCTCAAGAACTGGCTTTCACGATTTGAATGTGGCGTCACGAAAAGCTGAAGAAGCGGCTTGGAGACGTTATGAAGCCGCAGAGTGGCTTGAAAGGGAAGTGGGCCCGCTCGGCATATCCAATCAGCCGTCGGAGAGAGAATTCATTTCTTGCTTAAGAAATGGTCTCGTTCTCTGCAACGCAATCAACAAGATTCATGCAGGAGCCGTCCCCAAGGTTGTGGATTGTCAAATGCCCTTGCAATCGGTTGCTAGGGATTTCCAGCCTTTGCCTGCCTACCAGTACTTCGAAAATGTAAGAAATTTTCTGGTTGCAGCAGAAGAATTAAAGCTTCCACCCTTTGAGGCTTCTGATCTTGAACGGGATGCTGTAGACGTGGGATCAGTATCTAAGGTTGTCGATTGCGTTTTAGCGCTTAAATCGCATCAAGAGTGGAAGGGGACAAATACTGAGAATGGAAGTAACAGGCACTTAAGATCTCCTTTTTTAATGCACTCTGCCAGTAGAATGTATCCAAGACCCTCAGCTGCAATCTCTTCGGATGCCTGTAGGCGCCTGGATTTGTCAGCCACGTCAGATAAAGAGCATTCTCTCGAGGGTGATTTTCAGAAACCAGAAGGCAAAATTGTGGAATCAATTGTTAAGCTATTGGTTGACTGTATGGTTGACGCCAAGGAAAATATTGACGGCAACCTTGTTGCTTCTATTCGTAATGCCCAACAGGATCCAATTAAGCTATTTAGTGGGATCATGTCAACTTGTGTTGGGGATCAGCTCCAAGCCAAGTTCCCCGAGTTAGCATTGCTGCTGAAGGGTTTTACAAAAGAAAGGAGCACTTTAAGTAATTCAACATCCACAGTGTCAGATGAATCTACACCTCAAAATTTTAAGTGTTGCAGAGGCTGCACTACTAAGTGCACTTGCAGCCAGAAGCATCTCTTTGACCAGCAGGAAAAAGAACTTGTGGATCTCAAAGCTCTGCTGTCGAAAACTAAGAATGAGTTTGAAGAGATGAAGTCCCAGTTTCAAAGAGATCTGAATTACCTAGGCTGCCAGGTACTGGAAATGTCCACTGCTGCATGTGGATATTACAAGGTGGTGAAGGAGAACAGCAAGTTATATAATATGGTCCAAGATCTGAAAGGTAATATTCGAGTTTACTGCAGAATTAGGCCATCCTCCTGTGCTGAGTCCAAGAATGTTATAGAGTTCATTGGAAAGGATGGTTCTCTAGTCCTATTAGATCCATCAAAAACACAAAAAGATGGAAGGAAAGTTTTTCAGTTTAATCGGGTTTTTGGACCATCGGCTGGCCAAGGTGAAATATACACGGACACTCGACCACTAATTAGATCTGTGATAGATGGATATAACGTTTGCATATTTGCTTATGGACAAACTGGATCTGGGAAGACATATACCATGAGTGGGCCATCAGGTGGATCTTCTAAAGATATGGGGATTAATTATCTTGCATTAAATGATCTTTTCCAGATGTCTAACCAGCGAAAGGACATTATAACTTACGACATTTACGTTCAAATGGTTGAGATTTACAATGAGCAAGTAAGAGACTTGCTTTTCGTTTCTTTAACGTACCACAAATTAGAGATACGAAGTTGTAATGACAATGGCTTGAACCTTCCGGATGCTACATTGCGTTCTGTAAAATCTACACATGATGTATTGAGCCTCATGAAACTTGGTGAGGTTAACCGAGCTGTTAGTTCCACTTCCATCAACAACCGGAGTAGTCGTTCCCACAGTGTTCTCACCGTGCATGTTCATGGCAAAGATATCTCTGGGAGCTCCATTCGTGGTTGCTTGCATTTGATAGACCTTGCTGGAAGTGAGCGAGTGGAGAAGTCTGAAGTTACAGGGGAAAGACTAAAAGAAGCACAATTCATCAACAAGTCTCTTTCCTGTTTGGGGGATGTGATCACAGCCCTGGCTCAAAGAAACTCTCACATCCCTTACCGGAATAGTAAACTCACCCTTCTGTTGCAGGATTCCTTAGGTGGGCAAGCCAAAACATTGATGTTTGCTCATGTGAGTCCTGAAGAAGAGTCCTTTGGCGAAACAATCAGCACTCTAAAGTTTGCTCAGCGAGTTTCCACTGTGGAACTTGGAGCAGCTCGATCGAATAGAGAAAGTAGGGAGGTTATGCAACTTAAGGAACAGGTTGAGAACCTTAAGATGGCATTGTCGAACAAGGAAGCACAGAGAGTACAGTTAAGTAGGACTAAAGAACCAAGGACTCCATCTGAGAAAACTCCATTGCGCCTTAGAAGACTTAGCATTGAGAACTGTAGCGCCACAAGGAATGACAACACTTCTATGAAGCCTGACGATAAAAGTGGAATGAAATCACCTTCTTTTATGCCTCGTTCAAGAAGATTGAGCTTGGAAGGTTCAAAAAGCATAATCAAGAAGGGCACTGTACAGCCAAAAGATGTTACTGACGTAGACCAATCTTTACAGTTGGATTCAGTATCTCAACAGAAAAACCGTTCTCTGCGAGATGCTGATCCAGCGCCAAAACTAGTCGGGCATTTCAGTAGTAGCAGTTCCAAGTTAGAGTTGCACACTAAAGCTCCTCGAAGTCCTACAAGCATTAAATATCAGAAGAAGGTGATCAAAATAGATTGTGCAGCTCAAGTTCATCCACTTAAACTACCTGAGACACCTGAAACACAAGGGTTTGATAAGACTGAAACATATAAAGCTGTATGGAGCGATGTTGCGGTTTCCATGGATTTCCAGACACCAAATGTGGTTAGCAGCACAAATGGCAAAGGTTCCCAAATAAGGAAATCCTTACGGACCATAGGAAAACTCATTAATGGACCAGATAAGAGGAGCCAACAAAATATGGTGGAAGTGAAGTCACCCATGAAGAGCAATACTAACATAATTGAAGCAAAATCACCACCAAGTTCTGTTGCGAGAACAAAAAGGAGACAATCTCTAACGGGGATTCAAGCACCTGGCACTGAAAACTCCCGTAGATCTTCTCTTGGAGGGAAGTCTGTGGTCTCCAGCGATAAGGAGCACAGAAACACGAAAACGCCTCCTACAATGCGATCAGCCACCAAGAGTGGGAAACGGTGGCTATAG | 3126 | 0.4341 | MEDCSRTGFHDLNVASRKAEEAAWRRYEAAEWLEREVGPLGISNQPSEREFISCLRNGLVLCNAINKIHAGAVPKVVDCQMPLQSVARDFQPLPAYQYFENVRNFLVAAEELKLPPFEASDLERDAVDVGSVSKVVDCVLALKSHQEWKGTNTENGSNRHLRSPFLMHSASRMYPRPSAAISSDACRRLDLSATSDKEHSLEGDFQKPEGKIVESIVKLLVDCMVDAKENIDGNLVASIRNAQQDPIKLFSGIMSTCVGDQLQAKFPELALLLKGFTKERSTLSNSTSTVSDESTPQNFKCCRGCTTKCTCSQKHLFDQQEKELVDLKALLSKTKNEFEEMKSQFQRDLNYLGCQVLEMSTAACGYYKVVKENSKLYNMVQDLKGNIRVYCRIRPSSCAESKNVIEFIGKDGSLVLLDPSKTQKDGRKVFQFNRVFGPSAGQGEIYTDTRPLIRSVIDGYNVCIFAYGQTGSGKTYTMSGPSGGSSKDMGINYLALNDLFQMSNQRKDIITYDIYVQMVEIYNEQVRDLLFVSLTYHKLEIRSCNDNGLNLPDATLRSVKSTHDVLSLMKLGEVNRAVSSTSINNRSSRSHSVLTVHVHGKDISGSSIRGCLHLIDLAGSERVEKSEVTGERLKEAQFINKSLSCLGDVITALAQRNSHIPYRNSKLTLLLQDSLGGQAKTLMFAHVSPEEESFGETISTLKFAQRVSTVELGAARSNRESREVMQLKEQVENLKMALSNKEAQRVQLSRTKEPRTPSEKTPLRLRRLSIENCSATRNDNTSMKPDDKSGMKSPSFMPRSRRLSLEGSKSIIKKGTVQPKDVTDVDQSLQLDSVSQQKNRSLRDADPAPKLVGHFSSSSSKLELHTKAPRSPTSIKYQKKVIKIDCAAQVHPLKLPETPETQGFDKTETYKAVWSDVAVSMDFQTPNVVSSTNGKGSQIRKSLRTIGKLINGPDKRSQQNMVEVKSPMKSNTNIIEAKSPPSSVARTKRRQSLTGIQAPGTENSRRSSLGGKSVVSSDKEHRNTKTPPTMRSATKSGKRWL | 1041 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pral865g00005 | 1041 | MobiDBLite | consensus disorder prediction | 821 | 842 | - | - | |
| Pral865g00005 | 1041 | MobiDBLite | consensus disorder prediction | 741 | 873 | - | - | |
| Pral865g00005 | 1041 | MobiDBLite | consensus disorder prediction | 952 | 1014 | - | - | |
| Pral865g00005 | 1041 | Coils | Coil | 317 | 344 | - | - | |
| Pral865g00005 | 1041 | SMART | kinesin_4 | 384 | 718 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Pral865g00005 | 1041 | Pfam | Calponin homology (CH) domain | 25 | 146 | IPR001715 | GO:0005515 | |
| Pral865g00005 | 1041 | MobiDBLite | consensus disorder prediction | 950 | 1041 | - | - | |
| Pral865g00005 | 1041 | SMART | ch_5 | 25 | 142 | IPR001715 | GO:0005515 | |
| Pral865g00005 | 1041 | SUPERFAMILY | Calponin-homology domain, CH-domain | 22 | 152 | IPR036872 | - | |
| Pral865g00005 | 1041 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 30 | 896 | IPR027640 | GO:0003777|GO:0007018 | |
| Pral865g00005 | 1041 | CDD | CH_AtKIN14-like | 25 | 144 | - | - | |
| Pral865g00005 | 1041 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 386 | 743 | IPR027417 | - | |
| Pral865g00005 | 1041 | Gene3D | Kinesin motor domain | 328 | 713 | IPR036961 | - | |
| Pral865g00005 | 1041 | FunFam | Kinesin-like protein KIN-14L | 11 | 174 | - | - | |
| Pral865g00005 | 1041 | ProSiteProfiles | Calponin homology (CH) domain profile. | 23 | 147 | IPR001715 | GO:0005515 | |
| Pral865g00005 | 1041 | Gene3D | - | 10 | 163 | IPR036872 | - | |
| Pral865g00005 | 1041 | PRINTS | Kinesin heavy chain signature | 611 | 629 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Pral865g00005 | 1041 | PRINTS | Kinesin heavy chain signature | 660 | 681 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Pral865g00005 | 1041 | PRINTS | Kinesin heavy chain signature | 459 | 480 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Pral865g00005 | 1041 | PRINTS | Kinesin heavy chain signature | 581 | 598 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Pral865g00005 | 1041 | MobiDBLite | consensus disorder prediction | 746 | 766 | - | - | |
| Pral865g00005 | 1041 | ProSiteProfiles | Kinesin motor domain profile. | 386 | 710 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Pral865g00005 | 1041 | FunFam | Kinesin-like protein KIN-14A | 328 | 712 | - | - | |
| Pral865g00005 | 1041 | MobiDBLite | consensus disorder prediction | 853 | 873 | - | - | |
| Pral865g00005 | 1041 | Pfam | Kinesin motor domain | 392 | 709 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Pral865g00005 | 1041 | Coils | Coil | 717 | 751 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pral865g00005 | Pral-Chr865 | 20708 | 27066 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pral865g00005 | 333 | 756 | Calmodulin-binding Proteins | AT5G65930 | 39.120 | 7.69e-74 | 265 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pral865g00005 | K10406 | - | gmx:100786642 | 1304.66 |