Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral854g00007 ATGGCTTCTTCGCCAGTGATAGTTTTTGCGATTGCTTCTGCTGTTTGTGCGTTCTTCAGCTGCTTGGTTGTTGTATCCTCACAAGATCAAAACCTTACTACCGATCCTTCTGAAGCGAGAAGTGTGAATAGAATATTCGAGAAATGGGGGATATCGGCATTACCAAATGTGTGGAATATCAGCGGTGAGTTGTGCAGCGGAAGAGCTATCGACAGCACCACCACCGTTGACTCCTTAAATCCATTCATCAAATGCGACTGTTCTAGTGGCACTACCTGCCACATTACTGAACTGAGGGTTTATGCATTGGATGTTGTTGGGGAAATCCCAGAAGAGCTATGGACTCTGACTCACCTCACTAGTTTGGACATCCGACAAAATTACTTGACAGGTTCTCTACCTCCGGCCATTGGAAATCTAACTCGTATGCAATACATGTCCTTTGGCATCAATTCTTTATCAGGGGAGATTCCGAAGGAATTGGGAAATCTTACCGAGTTAATATCATTGAGTTTTGCATCAAATAGCTTCTCAGGTTCTATCCCATCCGAACTAGGAAATCTGGTGAAATTGCAACAACTCTACTTAATTAGTTCGGGACTTAATGGTCTGATTCCTCCTACATTTGCTAATCTAAAAAACCTACAGATATTCTGGGCTTCAGATATGGAACTCGCTGGCAGGATACCTGACTTCATAGGAAGTTGGTCTAAGCTCACAGGCTTGAGGCTTCAGGGTAATTCCTTTGAAGGACCAATACCATCATCCTTGGAAAATCTGACTTCTCTTACAGAGTTGAGAATAAGTGAAATATCTAATGGGAGCTCCTCACTAGCATTTATAAGGAATCTAAAGTCTTTGAATGTCTTAGTATTGAGAAATAACAATATTTCTGATTCAATTCCGTCAGACATTGGTGAATTTAAGAGTTTGACACAGCTGGATTTAAGCTTTAACAATATCACAGGACAGATTCCAGAATCACTTTTCAATCTGCGCTCACTAGCTTACTTATTTCTTGGAAACAATAAACTCAGTGGCACTATCCCTACACAGATAAGCCCGTCTCTTCTCAATATAGACTTGTCCTACAACAGTCTATCAGGGGGCCTCCCTTCTTGGGCGGACCAACCAAATTTACAAGTCAATTTGGTTGCCAACAACTTGACAATAAATTATTCAGATGGCAGTGGCCTTCCCTCTGGACTTGAATGTTTGCAGCGTAATTTTCCCTGTTTTCGTGGTCCTGGAAGATATTTTGACTTTGCTATCAAGTGTGCTGGTCCTCAAATTACAACATCAGATGGAACTAAATTTGAAAGTGAGAAAGAGACAATTGGTGCTGCTACATATTTTGTTACTAATTCAAGAAGATGGGCAGTTAGCAATGTTGGGTTATTTACTGGTTCAATCAATCCTCTATACAACAGATCTGTGCGTGGTCAATTCACTAATACTTTGGACCCAGAGCTCTTCTACACTGCTAGGATCTCTCCTTCTTCATTAAGATATTATGGCCTGGGCCTAGAAAATGGGGATTACAACATCTCCCTCTATTTTGCAGAAATGTCTATTCTAGATACTGCTTCATGGAAAAGTCTAGGAAGACGATTCTTTGATATTTATATCCAGGGGAATCGTGTTTTGAAGGATTTTAACATAAAAAAGGAAGCTAGGGGGCCCTCTTTTAGAGCTGTCCAAAAGGATTTTCGTGCTCATGTGTCAGAAAACTATCTAGAGATCCATCTCTTTTGGGCTGGAAAAGGGACTTGCTGCATACCAGACAAAGGTACTTATGGCCCTATGATTTCAGCGATTAAAGCTAGCCCAGATTTCATTCCTACGGTCAGCAACAGACCTCCAACCAATAACAAGGACAAAACTGGTTTGATTGTGGGAATTGTTGTTGGTATTGGAGTAGTAAGCTTTCTATCTTTTCTTGTGGTTTTCTGTACCATTCAGAAAAGAAAGCATCATAGAGATGGCAATGAAGAGCTCTTAGGTATTGATACGAAGCCATATACTTTCAAATATTCTGAGTTAAAGAATGCTACAGATGACTTCAATCCTGGCAACAAGTTGGGCGAGGGAGGTTTTGGTCCTGTTTATAAGGGAACACTTAATGACGGAAGAGTAACTGCTGTGAAACAATTATCTGTAGGATCTCATCAAGGAAAAAGCCAATTCGTAGCTGAGATTGCTACTATATCTGCCGTACAACATCGTAATCTTGTTAAATTATATGGATGTTGCATTGAAGGAAATAAAAGGCTTCTTGTTTATGAGTATTTGGAAAATAAGAGTCTTGATCAAGCACTATTTGGAAATTGTTTAGCTCTTAACTGGCCCACACGCTATGATATCTGCATGGGCATAGCAAGAGGTTTAACTTATCTTCATGAAGAGTCTCGGCTCCGCATTGTGCATCGTGACGTAAAAGCTAGTAATATCTTGCTTGATCGTGAGCTTGTCCCTAAAATATCTGATTTTGGTTTAGCCAAATTATATGATGATAAAAAGACGCATATAAGCACCCGTGTAGCTGGGACAATTGGATATCTTGCTCCGGAGTATGCCATGCGTGGGCACCTTACAGAGAAAGCCGATGTGTTTTCCTTTGGTGTTTTGGCCCTTGAGATAGTTAGTGGAAGGCCGAATGCTAATTCAAACTTGGAAGGGGAGAAGATCTATCTTTTAGAATGGGCTTGGCAGTTGCATGAAAGTAACTGTATAGGTGAACTAGTAGATCCTAAACTATCATCGGATTTCAATGAAGAAGAAGTTAAGAGAATGATAGGGATATCTCTTTTGTGCACTCAAACTTCACCACTAGCAAGGCCAGCAATGTCTCGAGTTGTGGCAATGCTTTCTGGAGATATGGAAGTGAGCACCGTAAGTTCAAAGCCTAGTTACTTGTCAGACTGGAAATTTGATGATGAGTACAACTTCACGACTGGCTTGGCCACAAAGGGATCAGAGACGAGTCAGTATAACTCATCCACAAGTACCACCATTGTCACTGCTCCAACTGCAAACCAATTACTTGTAGATGCTTCTAAACCCATCCTTGATCACACTCTTAGTGAAGGTAGATAA 3096 0.4076 MASSPVIVFAIASAVCAFFSCLVVVSSQDQNLTTDPSEARSVNRIFEKWGISALPNVWNISGELCSGRAIDSTTTVDSLNPFIKCDCSSGTTCHITELRVYALDVVGEIPEELWTLTHLTSLDIRQNYLTGSLPPAIGNLTRMQYMSFGINSLSGEIPKELGNLTELISLSFASNSFSGSIPSELGNLVKLQQLYLISSGLNGLIPPTFANLKNLQIFWASDMELAGRIPDFIGSWSKLTGLRLQGNSFEGPIPSSLENLTSLTELRISEISNGSSSLAFIRNLKSLNVLVLRNNNISDSIPSDIGEFKSLTQLDLSFNNITGQIPESLFNLRSLAYLFLGNNKLSGTIPTQISPSLLNIDLSYNSLSGGLPSWADQPNLQVNLVANNLTINYSDGSGLPSGLECLQRNFPCFRGPGRYFDFAIKCAGPQITTSDGTKFESEKETIGAATYFVTNSRRWAVSNVGLFTGSINPLYNRSVRGQFTNTLDPELFYTARISPSSLRYYGLGLENGDYNISLYFAEMSILDTASWKSLGRRFFDIYIQGNRVLKDFNIKKEARGPSFRAVQKDFRAHVSENYLEIHLFWAGKGTCCIPDKGTYGPMISAIKASPDFIPTVSNRPPTNNKDKTGLIVGIVVGIGVVSFLSFLVVFCTIQKRKHHRDGNEELLGIDTKPYTFKYSELKNATDDFNPGNKLGEGGFGPVYKGTLNDGRVTAVKQLSVGSHQGKSQFVAEIATISAVQHRNLVKLYGCCIEGNKRLLVYEYLENKSLDQALFGNCLALNWPTRYDICMGIARGLTYLHEESRLRIVHRDVKASNILLDRELVPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFSFGVLALEIVSGRPNANSNLEGEKIYLLEWAWQLHESNCIGELVDPKLSSDFNEEEVKRMIGISLLCTQTSPLARPAMSRVVAMLSGDMEVSTVSSKPSYLSDWKFDDEYNFTTGLATKGSETSQYNSSTSTTIVTAPTANQLLVDASKPILDHTLSEGR 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral854g00007 1031 FunFam Os05g0263100 protein 39 273 - -
Pral854g00007 1031 ProSiteProfiles Protein kinase domain profile. 688 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral854g00007 1031 FunFam Putative LRR receptor-like serine/threonine-protein kinase 764 968 - -
Pral854g00007 1031 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 24 989 - -
Pral854g00007 1031 SUPERFAMILY Protein kinase-like (PK-like) 671 974 IPR011009 -
Pral854g00007 1031 Pfam Malectin domain 422 606 IPR021720 -
Pral854g00007 1031 Gene3D Transferase(Phosphotransferase) domain 1 764 970 - -
Pral854g00007 1031 Pfam Protein tyrosine and serine/threonine kinase 691 955 IPR001245 GO:0004672|GO:0006468
Pral854g00007 1031 FunFam Putative LRR receptor-like serine/threonine-protein kinase 274 397 - -
Pral854g00007 1031 ProSiteProfiles Leucine-rich repeat profile. 310 332 IPR001611 GO:0005515
Pral854g00007 1031 FunFam Leucine-rich repeat receptor-like protein kinase 657 763 - -
Pral854g00007 1031 CDD STKc_IRAK 694 956 - -
Pral854g00007 1031 FunFam Leucine-rich repeat receptor-like protein kinase 419 610 - -
Pral854g00007 1031 SMART serkin_6 688 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral854g00007 1031 SMART LRR_typ_2 284 306 IPR003591 -
Pral854g00007 1031 SMART LRR_typ_2 308 332 IPR003591 -
Pral854g00007 1031 SMART LRR_typ_2 164 188 IPR003591 -
Pral854g00007 1031 SMART LRR_typ_2 116 140 IPR003591 -
Pral854g00007 1031 Gene3D - 421 609 - -
Pral854g00007 1031 Gene3D Phosphorylase Kinase; domain 1 649 763 - -
Pral854g00007 1031 ProSitePatterns Serine/Threonine protein kinases active-site signature. 807 819 IPR008271 GO:0004672|GO:0006468
Pral854g00007 1031 Gene3D Ribonuclease Inhibitor 275 394 IPR032675 -
Pral854g00007 1031 SUPERFAMILY L domain-like 92 406 - -
Pral854g00007 1031 Gene3D Ribonuclease Inhibitor 52 274 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral854g00007 Pral-Chr854 83935 109945 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral854g00007 143 1031 Receptor kinase-like Gene Family AT1G56120 61.504 0.0 1107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral854g00007 PK_Tyr_Ser-Thr 5.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral854g00007 - - gmx:100780567 1471.83