Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral853g00005 ATGTGGCTTGTTCCTCCTTACCATAAGCCTCTCTCTATTACACACTACTTCCTCCTCAAGCTTCAAACCCAAACCTCTGATTCACTGACCCATTTTCCTCAACTATATAATCAAAGCTTGAAAGTGCTGATCATATTTTTCAGTATGTCTGATTCACTCGGTGCATTCAAGCTTCACTCTTACTGCACTCCAAATCCCACCATTATTTCTCCATCATCAGCTCCAGAAATAACTCCAAATAATCCTTATTCTCTCTGTGCCCACTGTTACGTTGGAGAAGAAGCAGGTATTACAAGCAGCTCATCAAGGTGGAGTCCAACACCTGCGCAACTGCTATACCTTGAGCAAGTTTACAGACAAGGAACTAAGACGCCAACGGCTCAACAAATCCAGGTAATAGCTTCGCAGCTACGTCGTTTTGGCAAGATCGAAGCCAAGAATGTCTTCTACTGGTTCCAGAACCACAAAGCAAGAGAGCGCCAGAAACGTCGTCGTTGCGCCGACATGGAAATCTCTCCTCCCCCTTCTTCTCCTTCTGCTCTGCAAGAAAAAGATCATCATATGTGCGCTATGGGATTAACCTCACAAAACCTATCACCCCTACACGTTCTTCAAGGATTGAGAGGGACAAGTTATGAAGTTAAAGAGACAAAGAAGTGGTCATCTTCTTCAAACTGCAGTGCACTTGCAGAGGTCTCTGATCCGCTGAATAGAGCAGAAAGAGGAGCTTATAGAAGGACTCAAAGGGAGGAGAGAGAGACACGGATTTTGAGAATCAAGAGAGAGAAAAGCCAAGAAGCTAAGTGCCAAATTGGAGATATGTCTTGCTTCCTTTCAAATTCCAAGCATCTCATCAAAAGCATTACCACTTCAACTACAACTCATCATACACAAAATTCAAACCCTACAAATTATGATCGTTCTGCTGAAGAAGAAGAAGAAGTTGCAGATGACAGAACCCTTGAGCTGTTTCCTCTTGAGCGATCAGATGAAGATGAGGGCCTTTGTGTCACTGAAAGAAGGAAAGAGAAATTCTGTTCCTTCAATGCTTCCATGGACTCTGAAATCACTTCCAATCAGTTTTTTGAGTTCCTTCCCTTACGAAACTGA 1110 0.4315 MWLVPPYHKPLSITHYFLLKLQTQTSDSLTHFPQLYNQSLKVLIIFFSMSDSLGAFKLHSYCTPNPTIISPSSAPEITPNNPYSLCAHCYVGEEAGITSSSSRWSPTPAQLLYLEQVYRQGTKTPTAQQIQVIASQLRRFGKIEAKNVFYWFQNHKARERQKRRRCADMEISPPPSSPSALQEKDHHMCAMGLTSQNLSPLHVLQGLRGTSYEVKETKKWSSSSNCSALAEVSDPLNRAERGAYRRTQREERETRILRIKREKSQEAKCQIGDMSCFLSNSKHLIKSITTSTTTHHTQNSNPTNYDRSAEEEEEVADDRTLELFPLERSDEDEGLCVTERRKEKFCSFNASMDSEITSNQFFEFLPLRN 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral853g00005 369 Pfam Homeodomain 101 161 IPR001356 GO:0003677
Pral853g00005 369 SMART HOX_1 99 166 IPR001356 GO:0003677
Pral853g00005 369 SUPERFAMILY Homeodomain-like 100 165 IPR009057 -
Pral853g00005 369 MobiDBLite consensus disorder prediction 290 305 - -
Pral853g00005 369 Gene3D - 98 161 - -
Pral853g00005 369 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 95 364 IPR044555 GO:0003700|GO:0099402
Pral853g00005 369 CDD homeodomain 103 163 IPR001356 GO:0003677
Pral853g00005 369 ProSiteProfiles 'Homeobox' domain profile. 97 162 IPR001356 GO:0003677
Pral853g00005 369 MobiDBLite consensus disorder prediction 163 182 - -
Pral853g00005 369 MobiDBLite consensus disorder prediction 290 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral853g00005 Pral-Chr853 37990 40418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral853g00005 101 231 Wox Gene Family AT3G18010 47.328 1.11e-29 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pral853g00005 Homeodomain 3.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral853g00005 - - pcin:129321246 347.436