Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral847g00003 ATGGAGATTGGTAGGGGAGGATCGTCGTTCTCTTATTATACCATTCTTGGTATTAGTTCAGATTCAACCAGTACAGAAATAAGGAGAGCTTATCGCAAGCTTGCTCTGCAATGGCATCCAGACAGGTGGACAAGAACGCCTTCTTTGTTGAGTGAAGCCAAACAGAAATTTCAACAAATTCAAGAAGCTTATTCAGTTCTATCAGACCACAAGAAAAGAACAGTGTACGATGCAGGGTTATATGATCCTGAAGACGAAGAAGATGAGGGATTTTCTGAATTTATGGAAGAGATGGTGTCTCTCATGGCTCAAGTGAGGAGGGAGGAAAAGGATTATTACAGTATGGAGGAGTTACAGAGCATGTTTACTGAGATGGCTCAAGATTTCAATCAGTCACCTTCATGGCGTTGCGGCGCCTCCGTTATTGATGAGTCCCCTCAATCCGCAAAGAGGATCCGTTTGGAAAAACATGGGAGAACCTAA 483 0.4306 MEIGRGGSSFSYYTILGISSDSTSTEIRRAYRKLALQWHPDRWTRTPSLLSEAKQKFQQIQEAYSVLSDHKKRTVYDAGLYDPEDEEDEGFSEFMEEMVSLMAQVRREEKDYYSMEELQSMFTEMAQDFNQSPSWRCGASVIDESPQSAKRIRLEKHGRT 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral847g00003 160 SMART dnaj_3 10 72 IPR001623 -
Pral847g00003 160 ProSitePatterns Nt-dnaJ domain signature. 57 76 IPR018253 -
Pral847g00003 160 Gene3D DnaJ domain 10 135 IPR036869 -
Pral847g00003 160 MobiDBLite consensus disorder prediction 137 160 - -
Pral847g00003 160 Pfam DnaJ domain 12 77 IPR001623 -
Pral847g00003 160 PANTHER PUTATIVE, EXPRESSED-RELATED 9 139 - -
Pral847g00003 160 CDD DnaJ 12 69 IPR001623 -
Pral847g00003 160 SUPERFAMILY Chaperone J-domain 9 83 IPR036869 -
Pral847g00003 160 PRINTS DnaJ domain signature 150 160 IPR001623 -
Pral847g00003 160 PRINTS DnaJ domain signature 13 31 IPR001623 -
Pral847g00003 160 PRINTS DnaJ domain signature 31 46 IPR001623 -
Pral847g00003 160 PRINTS DnaJ domain signature 52 72 IPR001623 -
Pral847g00003 160 ProSiteProfiles dnaJ domain profile. 11 80 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral847g00003 Pral-Chr847 13140 34615 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral847g00003 12 78 C2H2 Transcription Factor Family AT1G74250 48.529 3.20e-14 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral847g00003 - - lja:Lj0g3v0084989.1 194.512