Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral845g00003 ATGGAGTCAACTGCAAGTTCCAAATCCTCCACAGCAGTCTTCCTCCTTCCCATCCTCTTCTTCTTCCTCCTCAATGTCTCTGCTTCTTCCAATCCCATCACTTCCTTCCCAAAACAAGCCTTGCCCACAAAATCGGGCTACCTCCCTGTTAACTCCACCTCCAAATCCGCCATTTTCTATGCTTTCTATGAAGCCCAGAACCTCACTACATCTCTCTCCCAAACCCCAGTTCTCATATGGCTCCAAGGCGGCCCTGGCTGTTCCTCCATGATTGGCAACTTCTTCGAGCTTGGTCCGTGGCGCGTCACCAAATCCCTCAATCTCGCCCCCAATCCTGGCTCTTGGAACAGAATCTTCGGCCTCCTTTTCCTCGATAGCCCAGTCGGAGCCGGATTCAGTGTCGCTTCAAACCCCGAGGAAATCCCCAGAGACCAGAAATCCGTAGCCAAGCACCTCTTCGCTGCCATAACCAAGTTCATTCAGCTTAACCCTGCTTTCAAGTATCGCCCAATTTATATAACCGGCGAAAGTTATGCTGGGAAGTATGTTCCTGCGATTGGGTATTACATATTACACAGGAATTCTCGATTGAATGTTTCACAGAGAGTGAATTTGGCAGGTGTGGCTATTGGGGATGGGTTAACACATCCTATAGTACAAGTTGCCACTCATGCTCTGAATGCTTACTATGTGGGGCTGATCAATGAGAGGCAGAAGAATGAATTGGAGGAGGCTCAATTGGAAGCCGTCAGATTGACCAAATTAGGGAATTGGAGTGCAGCAACAGATGCCAGAAGCAATGCTTTGAGACTGTTACAAAACATGACAGGGTTGGCTACTTTATATGACTACACAAGGAAAGCTCCATATGAGGATGATTTGGTAGCTGAGTTCTTGAAATCCAGCGAGGTGAAGAAGGCGTTGGGGGTGAATGAATCTATTGTGTTTGAAGGATGTAGTGATACTGTAGGAATTGCAATGAAAGAAGATATTATGAAGAGTGTGAAGTACATGGTGGAATACTTGGTGACAAAAACCAGAGTGCTTTTGTACCAAGGCCAGTATGATCTGAGAGATGGTGTGGTTCAAGTGGAAGCATGGGTGAAGAGAATGAAATGGGAAGGGATTGAGAAGTATTTGAATGCGGATAGGAAGATCTGGAAAGTGAATGGTGAGATTGCTGGGTATGTTCAAAAATGGCAGAGCCTTACTAATGTTGTTGTTTTAGGAGCTGGCCATCTTTTGCCTGCTGATCAATCTGTGAACTCTCAAGCCATGATTGAGAACTGGGTTTTGCAGAAGGATTTGTTTGAGAACAATGATCAACAGGAGAATGTGCCTCTAAGTTTTTGA 1353 0.4575 MESTASSKSSTAVFLLPILFFFLLNVSASSNPITSFPKQALPTKSGYLPVNSTSKSAIFYAFYEAQNLTTSLSQTPVLIWLQGGPGCSSMIGNFFELGPWRVTKSLNLAPNPGSWNRIFGLLFLDSPVGAGFSVASNPEEIPRDQKSVAKHLFAAITKFIQLNPAFKYRPIYITGESYAGKYVPAIGYYILHRNSRLNVSQRVNLAGVAIGDGLTHPIVQVATHALNAYYVGLINERQKNELEEAQLEAVRLTKLGNWSAATDARSNALRLLQNMTGLATLYDYTRKAPYEDDLVAEFLKSSEVKKALGVNESIVFEGCSDTVGIAMKEDIMKSVKYMVEYLVTKTRVLLYQGQYDLRDGVVQVEAWVKRMKWEGIEKYLNADRKIWKVNGEIAGYVQKWQSLTNVVVLGAGHLLPADQSVNSQAMIENWVLQKDLFENNDQQENVPLSF 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral845g00003 450 ProSitePatterns Serine carboxypeptidases, serine active site. 173 180 IPR018202 GO:0004185
Pral845g00003 450 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Pral845g00003 450 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 184 IPR001563 GO:0004185|GO:0006508
Pral845g00003 450 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Pral845g00003 450 PRINTS Carboxypeptidase C serine protease (S10) family signature 403 416 IPR001563 GO:0004185|GO:0006508
Pral845g00003 450 Pfam Serine carboxypeptidase 40 432 IPR001563 GO:0004185|GO:0006508
Pral845g00003 450 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 44 419 IPR001563 GO:0004185|GO:0006508
Pral845g00003 450 SUPERFAMILY alpha/beta-Hydrolases 42 434 IPR029058 -
Pral845g00003 450 Gene3D alpha/beta hydrolase 26 447 IPR029058 -
Pral845g00003 450 FunFam Carboxypeptidase 27 438 - -
Pral845g00003 450 Coils Coil 235 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral845g00003 Pral-Chr845 16593 18266 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral845g00003 295 436 Calmodulin-binding Proteins AT2G22960 23.810 3.65e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral845g00003 K09645 - gmx:100780822 660.603