Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral838g00002 ATGTCCCAGTTTGAGGAAATGCAGGAAACCGATGACGAAAACTCAATGCAGTGCCTTTCATGCCAGGATTATTACGTCCCAGGAGATGCCGGCACCTGCAGGGAGTGCTATGAAGAAGTCAACGAGACCGAGGAGGAGCTCAAGACTGAGATCGAAGACTTGAAGGCCAAAGTTGCCTTCCTCAGCCTCTTGTCTCCTGTTGATCACCATAATCGCTCCGATACTGACGTTATTTTGGTTCCCTCCGATGAGAGTTCTGATCCACCCTCCCTGACCGTTCCAGCTCACAGGGTTGTTCTGGTGAGTCGCTCCCCAGTGTTCAGAGCAATGCTTGAAAATGATATGGAGGAAAGACGAAGTGGTACCATTAAGATTAGTGATATGTCATACAATGCTCTTCGTGCCTTTGTTGATTATTTATACACTGCTGAAGCATGCCTTGATGACCAAATGGCCTGTGATCTGTTAGTTTTAGCTGAGAAGTATCAGGTGAAGCATCTCAAGGCATGCTGTGAAAAGTATTTGACGGCCAGATTGAACTGGGAAAAAGCAGTCGCGAATTACGCCTTTGCTCACCAACATAATGCTGAACAATTACTAGATGCAGCCCTGTCATTAATCACAGACAACATGGACAAGCTTTCTAAGCATGAGGAGTATGAGGATCTGGTCGAGAGCAACCCTCGTATTGTGGTTGAAATCTACGAAGCTTATCTCTCAAAACAGGTTAATACTGCAGCCAGCAAGAAATCTTTCAAAAAGAAATAG 768 0.4544 MSQFEEMQETDDENSMQCLSCQDYYVPGDAGTCRECYEEVNETEEELKTEIEDLKAKVAFLSLLSPVDHHNRSDTDVILVPSDESSDPPSLTVPAHRVVLVSRSPVFRAMLENDMEERRSGTIKISDMSYNALRAFVDYLYTAEACLDDQMACDLLVLAEKYQVKHLKACCEKYLTARLNWEKAVANYAFAHQHNAEQLLDAALSLITDNMDKLSKHEEYEDLVESNPRIVVEIYEAYLSKQVNTAASKKSFKKK 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral838g00002 255 CDD BTB_POZ_ZBTB_KLHL-like 75 162 - -
Pral838g00002 255 Gene3D - 181 255 - -
Pral838g00002 255 PANTHER SPECKLE-TYPE POZ PROTEIN 32 246 - -
Pral838g00002 255 Pfam BTB/POZ domain 74 177 IPR000210 GO:0005515
Pral838g00002 255 CDD BACK 188 223 - -
Pral838g00002 255 Coils Coil 33 64 - -
Pral838g00002 255 FunFam BTB/POZ domain-containing protein 181 254 - -
Pral838g00002 255 SMART BTB_4 75 179 IPR000210 GO:0005515
Pral838g00002 255 Gene3D Potassium Channel Kv1.1; Chain A 44 180 IPR011333 -
Pral838g00002 255 ProSiteProfiles BTB domain profile. 75 149 IPR000210 GO:0005515
Pral838g00002 255 SUPERFAMILY POZ domain 71 176 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral838g00002 Pral-Chr838 14745 17484 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pral838g00002 BTB 1e-22 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral838g00002 K10523 - csin:114267050 329.717