Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral837g00003 ATGCGAGAGACACCAGCAATGGAGGATTTGCAGAGTGCTCTAAAGGATCGTAATTTAACGGTTTCCACCGTGGCAGATAAGGGTCGCTGCCTCTTGGCTACGAGAGATTTTTACCCAGGAGACGTGATTATAAGCCAAGAGCCTTATGTGTGTGCGCCAAATAATTCTTCAGCCGAAACAAGGTGTGATGGATGTTTCGCGACAAGTAAACTTAAAAAGTGCTCTGGTTGTCAAGTTGTATGGTATTGTGGAAGTACATGCCAGAGGGCAGAGTGGAAGTTGCATCGTCTTGAATGTGAAGTTCTCTCAAGGCTGGAAAAGGACAAGAGAAAATTTGTCACACCATCCATTCGACTGATGGTAAAACTTTATCTTCGAAGGAAGTTGCAAAGTGAAAAGGTTATCCCAAGCACTGCTACAGACAACTATAGCTTGGTGGAGGCATTAGTGGCACGTATCCTTTTGTCATATTTTGTCTTTATGTCTATTGTACTTAACACGGTTCTGTATATGTTTTCTCACATATCAATGATGATTGTTATTTTTGACACACACTTCCATCTAGACATGTCTGACATCAATGAGGGACAGCTGGTTCTGTACGCGCAGATGGCTAATCTTGTAAACTTAATATTACAGTGGCCTGAAATCAACATAAAAGAGATTGCGGAAAATTTTTCCAGGTTTGCATGTAATGCGCATACCATTTGCGACAGTGAACTGAGACCCTTGGGGACAGGATTGTATCCTGTAATTTCCATAATCAACCACAGTTGCTTGCCCAATTCAGTGTTGGTTTTTGAGGGAAGGTCAGCTGTAGTACGTGCTGTGCAACATATACCCAAAGGTTCGGAGGTGCTGATAAGTTACATAGAGACTGCTGGGAGCACTATGACTCGGCAGAAGGCTCTCAAAGAGCAGTACCTGTTCACTTGCACCTGTCCCCGCTGTGCTAGAATGGGACAATCTGATGATATTCGAGAAAGCGCAATTTTGGAAGGATACAGATGCAAGAATGAAAAATGCTATGGTTTCTTGATGCGTACTAATGATGGAAGAGGATTCCAATGCCAAGAATGTGGACTAGTCAGGGACATGGAAGAGATAAAGTTGATTGCAACGGAAGTAAAATCACTAACTGAAGATAAAGCTTCTAAACTTGATCCAACTGGCAATTATCAGGATGCTGTTGCTGCATACAAAATAATTGAGAAATTGCAATCAGAATTATGCCATCCCTTTTCAATCAGCTTGATGCAAACTCGAGAAAAGCTTTTGAAGTTATTGATGGAGGTGGAACATTGGAGAGAAGCTCTGGCATACTGCAAATTGACCTTACCAGTCTATCAAAATCTAAAACCCCCTGCTCTTATTCAGTTTGAGCTGCAAAATCCACACATGCTGCTGATGTCTAGTCCTGGACTTTCTATTCTATTACAGAGTTTATCCAGCAGTTCATCCATTGCTTGGTTTGCAATATTATACTTGTGGAAAGCTTGA 1500 0.4173 MRETPAMEDLQSALKDRNLTVSTVADKGRCLLATRDFYPGDVIISQEPYVCAPNNSSAETRCDGCFATSKLKKCSGCQVVWYCGSTCQRAEWKLHRLECEVLSRLEKDKRKFVTPSIRLMVKLYLRRKLQSEKVIPSTATDNYSLVEALVARILLSYFVFMSIVLNTVLYMFSHISMMIVIFDTHFHLDMSDINEGQLVLYAQMANLVNLILQWPEINIKEIAENFSRFACNAHTICDSELRPLGTGLYPVISIINHSCLPNSVLVFEGRSAVVRAVQHIPKGSEVLISYIETAGSTMTRQKALKEQYLFTCTCPRCARMGQSDDIRESAILEGYRCKNEKCYGFLMRTNDGRGFQCQECGLVRDMEEIKLIATEVKSLTEDKASKLDPTGNYQDAVAAYKIIEKLQSELCHPFSISLMQTREKLLKLLMEVEHWREALAYCKLTLPVYQNLKPPALIQFELQNPHMLLMSSPGLSILLQSLSSSSSIAWFAILYLWKA 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral837g00003 499 ProSitePatterns Zinc finger MYND-type signature. 62 99 IPR002893 -
Pral837g00003 499 Gene3D SET domain 210 290 IPR046341 -
Pral837g00003 499 Pfam MYND finger 62 99 IPR002893 -
Pral837g00003 499 SMART set_7 17 297 IPR001214 GO:0005515
Pral837g00003 499 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 21 456 - -
Pral837g00003 499 Gene3D - 52 101 - -
Pral837g00003 499 ProSiteProfiles SET domain profile. 17 291 IPR001214 GO:0005515
Pral837g00003 499 SUPERFAMILY SET domain 6 133 IPR046341 -
Pral837g00003 499 Pfam SET domain 28 290 IPR001214 GO:0005515
Pral837g00003 499 SUPERFAMILY SET domain 19 315 IPR046341 -
Pral837g00003 499 ProSiteProfiles Zinc finger MYND-type profile. 62 99 IPR002893 -
Pral837g00003 499 ProSitePatterns TatD deoxyribonuclease family signature 1. 181 189 IPR018228 -
Pral837g00003 499 Gene3D Tetratricopeptide repeat domain 293 469 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral837g00003 Pral-Chr837 284 5655 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral837g00003 SET 1.6e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral837g00003 K11426 - qsa:O6P43_015224 664.84