Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral837g00002 ATGCGAGAGACACCAGCAATGGAGGATTTGCAGAGTGCTCTAAAGGATCGTAATTTAACGGTTTCCACCGTGGCAGATAAGGGTCGCTGCCTCTTGGCTACGAGAGATTTTTACCCAGGAGACGTGATTATAAGCCAAGAGCCTTATGTGTGTGCGCCAAATAATTCTTCAGCCGAAACAAGGTGTGATGGATGTTTCGCGACAAGTAAACTTAAAAAGTGCTCTGGTTGTCAAGTTGTATGGTATTGTGGAAGTACATGCCAGAGGGCAGAGTGGAAGTTGCATCGTCTTGAATGTGAAGTTCTCTCAAGGCTGGAAAAGGACAAGAGAAAATTTGTCACACCATCCATTCGACTGATGGTAAAACTTTATCTTCGAAGGAAGTTGCAAAGTGAAAAGGTTATCCCAAGCACTGCTACAGACAACTATAGCTTGGTGGAGGCATTAGTGGCACACATGTCTGACATCAATGAGGGACAGCTGGTTCTGTACGCGCAGATGGCTAATCTTGTAAACTTAATATTACAGTGGCCTGAAATCAACATAAAAGAGATTGCGGAAAATTTTTCCAGGTTTGCATGTAATGCGCATACCATTTGCGACAGTGAACTGAGACCCTTGGGGACAGGATTGTATCCTGTAATTTCCATAATCAACCACAGTTGCTTGCCCAATTCAGTGTTGGTTTTTGAGGGAAGGTCAGCTGTAGTACGTGCTGTGCAACATATACCCAAAGGTTCGGAGGTGCTGATAAGTTACATAGAGACTGCTGGGAGCACTATGACTCGGCAGAAGGCTCTCAAAGAGCAGTACCTGTTCACTTGCACCTGTCCCCGCTGTGCTAGAATGGGACAATCTGATGATATTCGAGAAAGCGCAATTTTGGAAGGATACAGATGCAAGAATGAAAAATGCTATGGTTTCTTGATGCGTACTAATGATGGAAGAGGATTCCAATGCCAAGAATGTGGACTAGTCAGGGACATGGAAGAGATAAAGTTGATTGCAACGGAAGTAAAATCACTAACTGAAGATAAAGCTTCTAAACTTGATCCAACTGGCAATTATCAGGATGCTGTTGCTGCATACAAAATAATTGAGAAATTGCAATCAGAATTATGCCATCCCTTTTCAATCAGCTTGATGCAAACTCGAGAAAAGCTTTTGAAGTTATTGATGGAGGTGGAACATTGGAGAGAAGCTCTGGCATACTGCAAATTGACCTTACCAGTCTATCAAAATCTAAAACCCCCTGCTCTTATTCAGTTTGAGCTGCAAAATCCACACATGCTGCTGATGTCTAGTCCTGGACTTTCTATTCTATTACAGAGTTTATCCAGCAGTTCATCCATTGCTTGGTTTGCAATATTATACTTGTGGAAAGCTTGA 1389 0.4262 MRETPAMEDLQSALKDRNLTVSTVADKGRCLLATRDFYPGDVIISQEPYVCAPNNSSAETRCDGCFATSKLKKCSGCQVVWYCGSTCQRAEWKLHRLECEVLSRLEKDKRKFVTPSIRLMVKLYLRRKLQSEKVIPSTATDNYSLVEALVAHMSDINEGQLVLYAQMANLVNLILQWPEINIKEIAENFSRFACNAHTICDSELRPLGTGLYPVISIINHSCLPNSVLVFEGRSAVVRAVQHIPKGSEVLISYIETAGSTMTRQKALKEQYLFTCTCPRCARMGQSDDIRESAILEGYRCKNEKCYGFLMRTNDGRGFQCQECGLVRDMEEIKLIATEVKSLTEDKASKLDPTGNYQDAVAAYKIIEKLQSELCHPFSISLMQTREKLLKLLMEVEHWREALAYCKLTLPVYQNLKPPALIQFELQNPHMLLMSSPGLSILLQSLSSSSSIAWFAILYLWKA 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral837g00002 462 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 21 419 - -
Pral837g00002 462 SUPERFAMILY SET domain 6 253 IPR046341 -
Pral837g00002 462 ProSitePatterns Zinc finger MYND-type signature. 62 99 IPR002893 -
Pral837g00002 462 Gene3D - 61 111 - -
Pral837g00002 462 Gene3D - 112 196 - -
Pral837g00002 462 SMART set_7 17 260 IPR001214 GO:0005515
Pral837g00002 462 Pfam MYND finger 62 99 IPR002893 -
Pral837g00002 462 Pfam SET domain 28 253 IPR001214 GO:0005515
Pral837g00002 462 Gene3D SET domain 30 280 IPR046341 -
Pral837g00002 462 ProSiteProfiles Zinc finger MYND-type profile. 62 99 IPR002893 -
Pral837g00002 462 ProSiteProfiles SET domain profile. 17 254 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral837g00002 Pral-Chr837 284 5655 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral837g00002 SET 2.4e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral837g00002 K11426 - qsa:O6P43_015224 685.256