Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral837g00001 ATGCGAGAGACACCAGCAATGGAGGATTTGCAGAGTGCTCTAAAGGATCGTAATTTAACGGTTTCCACCGTGGCAGATAAGGGTCGCTGCCTCTTGGCTACGAGAGATTTTTACCCAGGAGACGTGATTATAAGCCAAGAGCCTTATGTGTGTGCGCCAAATAATTCTTCAGCCGAAACAAGGTGTGATGGATGTTTCGCGACAAGTAAACTTAAAAAGTGCTCTGGTTGTCAAGTTGTATGGTATTGTGGAAGTACATGCCAGAGGGCAGAGTGGAAGTTGCATCGTCTTGAATGTGAAGTTCTCTCAAGGCTGGAAAAGGACAAGAGAAAATTTGTCACACCATCCATTCGACTGATGGTTATCCCAAGCACTGCTACAGACAACTATAGCTTGGTGGAGGCATTAGTGGCACACATGTCTGACATCAATGAGGGACAGCTGGTTCTGTACGCGCAGATGGCTAATCTTGTAAACTTAATATTACAGTGGCCTGAAATCAACATAAAAGAGATTGCGGAAAATTTTTCCAGGTTTGCATGTAATGCGCATACCATTTGCGACAGTGAACTGAGACCCTTGGGGACAGGATTGTATCCTGTAATTTCCATAATCAACCACAGTTGCTTGCCCAATTCAGTGTTGGTTTTTGAGGGAAGGTCAGCTGTAGTACGTGCTGTGCAACATATACCCAAAGGTTCGGAGGTGCTGATAAGTTACATAGAGACTGCTGGGAGCACTATGACTCGGCAGAAGGCTCTCAAAGAGCAGTACCTGTTCACTTGCACCTGTCCCCGCTGTGCTAGAATGGGACAATCTGATGATATTCGAGAAAGCGCAATTTTGGAAGGATACAGATGCAAGAATGAAAAATGCTATGGTTTCTTGATGCGTACTAATGATGGAAGAGGATTCCAATGCCAAGAATGTGGACTAGTCAGGGACATGGAAGAGATAAAGTTGATTGCAACGGAAGTAAAATCACTAACTGAAGATAAAGCTTCTAAACTTGATCCAACTGGCAATTATCAGGATGCTGTTGCTGCATACAAAATAATTGAGAAATTGCAATCAGAATTATGCCATCCCTTTTCAATCAGCTTGATGCAAACTCGAGAAAAGCTTTTGAAGTTATTGATGGAGGTGGAACATTGGAGAGAAGCTCTGGCATACTGCAAATTGACCTTACCAGTCTATCAAAATCTAAAACCCCCTGCTCTTATTCAGTTTGAGCTGCAAAATCCACACATGCTGCTGATGTCTAGTCCTGGACTTTCTATTCTATTACAGAGTTTATCCAGCAGTTCATCCATTGCTTGGTTTGCAATATTATACTTGTGGAAAGCTTGA 1350 0.4289 MRETPAMEDLQSALKDRNLTVSTVADKGRCLLATRDFYPGDVIISQEPYVCAPNNSSAETRCDGCFATSKLKKCSGCQVVWYCGSTCQRAEWKLHRLECEVLSRLEKDKRKFVTPSIRLMVIPSTATDNYSLVEALVAHMSDINEGQLVLYAQMANLVNLILQWPEINIKEIAENFSRFACNAHTICDSELRPLGTGLYPVISIINHSCLPNSVLVFEGRSAVVRAVQHIPKGSEVLISYIETAGSTMTRQKALKEQYLFTCTCPRCARMGQSDDIRESAILEGYRCKNEKCYGFLMRTNDGRGFQCQECGLVRDMEEIKLIATEVKSLTEDKASKLDPTGNYQDAVAAYKIIEKLQSELCHPFSISLMQTREKLLKLLMEVEHWREALAYCKLTLPVYQNLKPPALIQFELQNPHMLLMSSPGLSILLQSLSSSSSIAWFAILYLWKA 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral837g00001 449 Gene3D SET domain 30 267 IPR046341 -
Pral837g00001 449 ProSitePatterns Zinc finger MYND-type signature. 62 99 IPR002893 -
Pral837g00001 449 Gene3D - 61 108 - -
Pral837g00001 449 ProSiteProfiles SET domain profile. 17 241 IPR001214 GO:0005515
Pral837g00001 449 Gene3D - 109 183 - -
Pral837g00001 449 SUPERFAMILY SET domain 6 240 IPR046341 -
Pral837g00001 449 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 21 406 - -
Pral837g00001 449 ProSiteProfiles Zinc finger MYND-type profile. 62 99 IPR002893 -
Pral837g00001 449 Pfam MYND finger 62 99 IPR002893 -
Pral837g00001 449 Pfam SET domain 28 240 IPR001214 GO:0005515
Pral837g00001 449 SMART set_7 17 247 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral837g00001 Pral-Chr837 284 5655 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral837g00001 SET 8.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral837g00001 K11426 - qsa:O6P43_015224 652.514