Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral835g00006 ATGAGAAGGAGGCATTTATCTGAGTATGATGACATTGAGGACTTCCTACGAAGTCACAGCAATTTAGTGCCCATCAAATACTCTTACTCTGACATAAGAAGAATGACAAAAAATTTCAAGCATAAGTTAGGAGAAGGGGGTTATGGTTCTGTATATAAAGGAAAGCTTCGAAGCAAGCGTGATGCGGCTGTTAAGCTATTAGGCAAGTCAACAACGGATGGGCATGATTTCATCAATGAAGTTTCCACCATTGGAACTATTCGTCATGTAAATGTGGTGCAACTGATAGGATTTTGTGCAGAGAGAAGAAAGCAAGCTCTTGTTTATGAGTTCATGCCAAACGGATCTTTAGATAAATACATACTTTCTGAGCATGAAAAATCATCAATAAATTATGAGAAGATCAATGAGATTTCTTTAGGGGTGGCTCGTGGGATTGAGTACCTACATCAAGGTTGCGACAAGCAAATCCTACACTTTGATATCAAACCTCACAATATTCTTCTTGATGAGAATTTTTCTCCCAAGATTTCAGACTTTGGATTGGCAAAACTATATCCAACAGATAAAAGTATTGTGTCTCTAACTGCAGCTAGAGGCACAATGGGATACATGGCTCCTGAATTGCTGTATAAAAACATTGGAGGCATCTCACACAAGGCTGATGTTTATAGTTTTGGGATGATGCTGATGGAAATGGCAGGAAGAAGAAAGAACTATGATGTTGTGCAGAATTCGTGGCAGACTTACTTTGCGAAATGGGTTCATGATCAGTTTGAAGAAACAATATTTAAAAGCAATGCCACAGAAGAAGAGAAGAAGATAGCCCAGAAAATGATTACAGTTGCTTTTACTTGCATACAGCTGAGCCCAAGTGATCGCCCCTCAATGAGCAGAGTAGTGGAGATGCTTCAAGGAGATGTTGATGTCTCAGAGATCTTCAGAGCATAG 951 0.3933 MRRRHLSEYDDIEDFLRSHSNLVPIKYSYSDIRRMTKNFKHKLGEGGYGSVYKGKLRSKRDAAVKLLGKSTTDGHDFINEVSTIGTIRHVNVVQLIGFCAERRKQALVYEFMPNGSLDKYILSEHEKSSINYEKINEISLGVARGIEYLHQGCDKQILHFDIKPHNILLDENFSPKISDFGLAKLYPTDKSIVSLTAARGTMGYMAPELLYKNIGGISHKADVYSFGMMLMEMAGRRKNYDVVQNSWQTYFAKWVHDQFEETIFKSNATEEEKKIAQKMITVAFTCIQLSPSDRPSMSRVVEMLQGDVDVSEIFRA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral835g00006 316 SMART serkin_6 37 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral835g00006 316 ProSitePatterns Protein kinases ATP-binding region signature. 43 65 IPR017441 GO:0005524
Pral835g00006 316 FunFam serine/threonine-protein kinase PBS1-like 7 111 - -
Pral835g00006 316 SUPERFAMILY Protein kinase-like (PK-like) 18 304 IPR011009 -
Pral835g00006 316 FunFam PR5-like receptor kinase 112 314 - -
Pral835g00006 316 Gene3D Phosphorylase Kinase; domain 1 14 111 - -
Pral835g00006 316 PIRSF ILK 19 310 - -
Pral835g00006 316 ProSiteProfiles Protein kinase domain profile. 37 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral835g00006 316 Gene3D Transferase(Phosphotransferase) domain 1 112 312 - -
Pral835g00006 316 PANTHER RUST RESISTANCE KINASE LR10-RELATED 10 308 IPR045874 GO:0004672
Pral835g00006 316 Pfam Protein kinase domain 40 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral835g00006 316 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral835g00006 Pral-Chr835 55104 56206 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral835g00006 26 313 Receptor kinase-like Gene Family AT5G38280 50.842 5.55e-106 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral835g00006 Pkinase 3.7e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral835g00006 - - tpra:123914142 468.774