Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral835g00002 ATGCCCATCAAGCACTCCTACTCAGAGATCAACAAAATGACTAATGGCTTCAAACACAAGTTAGGTGAAGGACGCTATGGTCATGTCTTCCAAGGAAAGCTTCAAAGCAAACGTGATGTAGCTGTCAAGATATTACATCTTGACATTAAACCTCACAATATCCTTCTTGATGAAAATTTTGATAAAAAAGTTTCTGATTTTGGATTGTCAAAGTTGTATTCCTTAGATGATAGCATTGTATCTCTAACTAATGCAAGAGGAACACTGGGATACAAGGCACCTGAATTATTTTACAAGAACATTGGAGGGATATCACATAAAGCTGATGTTTATAGTATTGGGATGCTGTTCATGGAAATGGCAGGTAGGAGGAAGAACTTGAATCTTATTGAGCATTCTTGGCAAACCCATTTTTCCAAATGGGTTTATGACCAATTTGAAGAATCCATAGAAGTGAGTGGTACCACTGGAGAGGAAAGGGAAATTGCGATGAAGATGATTGTTTTAGCTTCACATTGCATACAAATGAATCCCAGTGATCCACCCTCAATGAAGAAAGTGATAGAGATGCTCGAGGGAGAAATTGACCTCCAAGTGGCTTTTCCACCGTACCAACCCTCTATAACTTGGAAAGGGATTCCAAAAGGGGATGTTGAATTGTTGATATATAATTGGAAGAATTTGAATTCAGAATGA 696 0.3807 MPIKHSYSEINKMTNGFKHKLGEGRYGHVFQGKLQSKRDVAVKILHLDIKPHNILLDENFDKKVSDFGLSKLYSLDDSIVSLTNARGTLGYKAPELFYKNIGGISHKADVYSIGMLFMEMAGRRKNLNLIEHSWQTHFSKWVYDQFEESIEVSGTTGEEREIAMKMIVLASHCIQMNPSDPPSMKKVIEMLEGEIDLQVAFPPYQPSITWKGIPKGDVELLIYNWKNLNSE 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral835g00002 231 SMART serkin_6 15 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral835g00002 231 SUPERFAMILY Protein kinase-like (PK-like) 6 209 IPR011009 -
Pral835g00002 231 Gene3D Transferase(Phosphotransferase) domain 1 33 199 - -
Pral835g00002 231 ProSiteProfiles Protein kinase domain profile. 1 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral835g00002 231 ProSitePatterns Serine/Threonine protein kinases active-site signature. 44 56 IPR008271 GO:0004672|GO:0006468
Pral835g00002 231 PANTHER RUST RESISTANCE KINASE LR10-RELATED 4 45 IPR045874 GO:0004672
Pral835g00002 231 ProSitePatterns Protein kinases ATP-binding region signature. 21 43 IPR017441 GO:0005524
Pral835g00002 231 Pfam Protein kinase domain 43 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral835g00002 Pral-Chr835 13400 14371 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral835g00002 4 47 Receptor kinase-like Gene Family AT5G38280 55.556 8.07e-09 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral835g00002 Pkinase 1.7e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral835g00002 - - tpra:123914142 228.024