Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral835g00001 ATGAAACGGCATAGCGGATTGGTCATCCTATTCTTTTTCTTCTGCGTCTTGACTACATTCACTCAACCACACTTCCCTCATCCATGCACGGTAACAAGTTGCGGGGTTGATGGACCTGCCATTCGATTCCCCTTTAGGCTCAAAGGAAAACAGCCAGAATGGTGTGCATATAATCCTGGCTTTGATCTTTACTGTAATGAAACAAACCACACGGTGCTCGAGCTGCCCTTCTCTGTCAAGGTTATCGTACGCGACATTGACTATAAAAAACAATTCTTTGCTGTGTCTGACCCTGATGGATGCCTTGCTCATCTCAATTTATCTGCATCGCCTTTTCGGTCAAATGATTATTATGACTCAAGCCGAAATGCGATATTCAATTGCTCAGGGACGTCTCGTAGAGATTCAAATCAATTTCCAAAATTGGGAAACTTCTCTTGTCTCGATGTTGCCGGCTATGAGGTTTTAGCTGTACCATACTTTGCGGATATCATAGACTATCCTCTTCTATCATGCACGAGAATTCCTGGTTATGCATCAGTCCCCGATTCATTTTTCTATGACAATGAGCCTATATATCTATCTTGGCTCGAACCAGATTGCAGAAAGTGTGAGGACCATGGAGGGCAGTGTAGATTGACAGAAAACAAAGTTGAACGTGAACCTGAATGTTTCCAAAACCCTCATACAGCAGGTCCATCAAAACAAATAGTACTCACTGGTGAAATCCTAGGCCCGTTCCTGCTCATGTTTGTTGGGTTTGTTGTTTATTGGGTTACTGCAGCTAGCCTAGAGAGGCAGGGTTACAAAAAAATTAAACTGTTTTTGGAGGATTACAAAGCACTTAGGCCTGCTAGATACTCGTATGCAGATATAAAGAGGATCACTAATCAGTTCAAGGATGAACTTGGACAAGGAGCTTACGGAACTGTCTTTAAAGGGAAGCTATCTAATGAGATTCAGGTGGCTGTGAAGCTTCTCAACACTTCAACTGGGAATGGACAAGAGTTCATCAATGAAATGGAGACCATGTGTCAAATTCACCATGTCAATGTGGCTCGCTTGGTTGGCTACTGTGCGGATGGTTTCAAACGAGCTTTGGTTTATGAATTTTTACCCAATAGTTCATTGCAGAAATTCATAACTTCAGCTGATAGGAAGGACCTTTTCCTGGGTTGGGGAAAGCTTCATGATATTGCTCTTGGCATAGCCAAAGGAATTGAGTACCTTCATGAAGATTGTGACAAACGGATCCTCCACTTTGATATCAAACCTCACAACATTCTGTTAGATGACAAATTCACTCCAAAAATATCTGATTTCGGTTTGGCCAAACTCTGTTCTAAGGACCAAAGCATTGTGTCAATGACAACAGCTAGGGGCACTTTGGGCTATATTGCACCGGAAATATTTTCTCGGAACTTTGGCAATGTGTCTTATAAATCAGATGTTTATAGCTATGGAATGTTACTGCTTGAAATGGTTGGAGGAAGGAAAATCACAGATGTCACAGAAGAAAATGGCGAGCAAGTTTACTACCCACAATGGATTTATAATCTTCTAGAGAACAATGAAGACATACAAATCCATGTGGAAGGAGAGGAGGACACTAAAATTGCAAGGAAGCTATCCATTATTGGACTTTGGTGCATTCAGTGGCATCCAGCAAACCGTCCAACCATGAAAAATGTGGTTCAAATGCTGGAAGGGGACGATGAAAAGCTAATCATGCCTCCTAATCCTTTTGGTTCTTCACATGCAATTAGAACAAGAGCTGCTAATGGAGTAAGGCAATTGCAACCAGAGTTATCTACCATTTCAGAAATAGAGTGA 1833 0.4168 MKRHSGLVILFFFFCVLTTFTQPHFPHPCTVTSCGVDGPAIRFPFRLKGKQPEWCAYNPGFDLYCNETNHTVLELPFSVKVIVRDIDYKKQFFAVSDPDGCLAHLNLSASPFRSNDYYDSSRNAIFNCSGTSRRDSNQFPKLGNFSCLDVAGYEVLAVPYFADIIDYPLLSCTRIPGYASVPDSFFYDNEPIYLSWLEPDCRKCEDHGGQCRLTENKVEREPECFQNPHTAGPSKQIVLTGEILGPFLLMFVGFVVYWVTAASLERQGYKKIKLFLEDYKALRPARYSYADIKRITNQFKDELGQGAYGTVFKGKLSNEIQVAVKLLNTSTGNGQEFINEMETMCQIHHVNVARLVGYCADGFKRALVYEFLPNSSLQKFITSADRKDLFLGWGKLHDIALGIAKGIEYLHEDCDKRILHFDIKPHNILLDDKFTPKISDFGLAKLCSKDQSIVSMTTARGTLGYIAPEIFSRNFGNVSYKSDVYSYGMLLLEMVGGRKITDVTEENGEQVYYPQWIYNLLENNEDIQIHVEGEEDTKIARKLSIIGLWCIQWHPANRPTMKNVVQMLEGDDEKLIMPPNPFGSSHAIRTRAANGVRQLQPELSTISEIE 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral835g00001 610 PANTHER RUST RESISTANCE KINASE LR10-RELATED 269 586 IPR045874 GO:0004672
Pral835g00001 610 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Pral835g00001 610 FunFam PR5-like receptor kinase 372 579 - -
Pral835g00001 610 Pfam Wall-associated receptor kinase galacturonan-binding 29 97 IPR025287 GO:0030247
Pral835g00001 610 SMART serkin_6 297 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral835g00001 610 Pfam Protein kinase domain 300 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral835g00001 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Pral835g00001 610 Gene3D Transferase(Phosphotransferase) domain 1 372 576 - -
Pral835g00001 610 SUPERFAMILY Protein kinase-like (PK-like) 281 569 IPR011009 -
Pral835g00001 610 ProSiteProfiles Protein kinase domain profile. 297 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral835g00001 610 ProSitePatterns Protein kinases ATP-binding region signature. 303 325 IPR017441 GO:0005524
Pral835g00001 610 FunFam serine/threonine-protein kinase PBS1-like 269 371 - -
Pral835g00001 610 Gene3D Phosphorylase Kinase; domain 1 275 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral835g00001 Pral-Chr835 4970 7181 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral835g00001 33 581 Receptor kinase-like Gene Family AT1G66910 37.148 6.33e-109 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral835g00001 Pkinase 9.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral835g00001 - - tpra:123914140 800.431