Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral831g00005 ATGAATGATGCGATGGCCAATCACCCACACTACCGATCCCAGTTCGGCGACACCACATTAACCAAGGTGTTCGTGGGAGGACTAGCTTGGGAGACGCCCACTGAAGAATTGCATAGATACTTCGAGCAGTTCGGAGATATTCTTGAAGCCGTTATCATCAACGATAAGCATACTGGGAAGTCTAAAGGCTATGGATTCGTCACTTTCCGTGATCCAGACTCAGCAAGAAAAGCTTGTGCGGATCCCAAACCGATGATACATGGTAGAAGAGCAAATTGCAATATTGCTTCTCTAGGACGGCCTCCGCCCCCACCTTCATCTCCTCGAGGAACGAACTTATCGGTGCAAGAT 351 0.4872 MNDAMANHPHYRSQFGDTTLTKVFVGGLAWETPTEELHRYFEQFGDILEAVIINDKHTGKSKGYGFVTFRDPDSARKACADPKPMIHGRRANCNIASLGRPPPPPSSPRGTNLSVQD 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral831g00005 117 Gene3D - 2 110 IPR012677 -
Pral831g00005 117 PANTHER BOULE-RELATED 10 108 - -
Pral831g00005 117 SMART rrm1_1 22 94 IPR000504 GO:0003723
Pral831g00005 117 MobiDBLite consensus disorder prediction 96 117 - -
Pral831g00005 117 SUPERFAMILY RNA-binding domain, RBD 13 109 IPR035979 GO:0003676
Pral831g00005 117 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 21 117 IPR000504 GO:0003723
Pral831g00005 117 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 23 80 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral831g00005 Pral-Chr831 30086 30721 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral831g00005 17 97 C2H2 Transcription Factor Family AT2G19380 40.741 3.28e-16 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral831g00005 K25006 - cpap:110816614 189.119