Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral830g00001 ATGGATCACTCATCCCACTTCCATCACCAGCACCAGCATCAGAATCAGCATGCAAGGTACGCTCCTCTTCCCCCTAATCACCCACGCCATTCACAGTTCCCCGAAGATCCCTGTCTGCGCCCTCACCAACTTCCTCCGCCGCCACCGCCGCAGGCACCAACTCTTCCACCCCCACCCCCTCCTCCTTCTCTTTCCTATCGAACCGTGCGCAACACTCCTCCAACGCATCCTCACCCCTATAATCCTCCTCATCAATCCCAGTTTTCTTTCAAGGCTCCAAACTATGCCAACCGTCCGGTTGAAGAAGAACGCCCTGTATCTTCTAGCCACCCTCACGATTTCACACATTCGCAGAGGGTTTCAAATCGGATGATCATCGATGATGACCGTCCGCGCCATAGTCTTCCTGATTTCGATTATCGCAATAACGATAACCGCATCGGTGGTTGGAACCCGCTGAGGGTTGTGTCAGATAATCGGCCGTCGAGGCCTTACCCTCCAATTGACTTTGACCGGCAATTGTATCATCAGCACCCATTGAATCACAAAATAGCCGCGCCATATCCGCCTGTTGATAAAGTTAGGTATAATTCAGAGGGCAACTCGAGGGGAAGAGTTGATCACATTGATAGGTATGAAGTCAAGACAAGGGAAGAATTTGCGTGGGGTAGAGGTGATGAGAAATATCATCGCCGCAGGGATTCTGGATCAAATCTCCATGCATCTTCGGGAGACTTCGGAATCATGTCTAGTCAGAGTACATTATCAAGGGATCTTGATTCCAAGAATGGCGATTATGTGCATCACGGCGTGGAACGGGACAACGAAATATCTAGGGGTACTAGAAGAGATGGACTTGGTGATAGCAAGAGGTGGGTAAATGATAGGAAGGGCCCCAGAGACCCACACAGTTCATCTTTTGAACTGGTAAACAACGAGAACGGTGGTGATGGTATTCGTCTAACCTCCGGGAAGTATTATGGTTCAGAATTGGGTAGATACAATAATAGAGGGAACAGGGAATCTGGTCATGAATTTAGTCGGGCTCCAAAGAAACAAATTCAGAAAAAGAGCGCACTTCTTAGAATTCAAATGGTAAAACCAAATCACAAGAACCGTGAGATTGAACAGTTACAATATACCAGCCATGGTGATGACACAAACTCTAATTCCTTTAGAGGGAAAGATCAATTTGAGTATTCAGGTTATGGGGTCAAAGCAGAAGAGAGAGAAAGAAGTCCTGTTGAGCTTGATATTTCTTTTAAATCAAATTCTCTGGTGGCTAAGGCAATTGTGGCACCTTCAAGTTCTGCAATTTCTGATGTCGATATCACCTCTGTTTCTGATACAGATTTTGTTCCTGCAGAAAAGGGAAAGAATAGTCTGGTCTCTGATAGTGATTCTCCTGGTTTAAAACCTGCCAAACCATCTATGGCTGCTGTAAACTTAGGTGGGTCACCTTGCAAGGTGAATTGCATCCCTAGTTCAAGCAAGGAGTTTAACTTACAGAAGAAGGTCTCTGACAGTTGTTCTCGGCGTTGTGCCGGTGTACCTACTAATTGTGATGTGAAAAATGAGGGGGCTCAAACCCCTAAGGGAATTGTTTCTCATGAAATTACCAACTCTTGTTCTGTTAAAACACATCCAAGGGTAGCCAAGAAGAAAAAAATTGTAAAGAAAGTGGTGAAGAAAGTTGTTTCGAATCCTAAATTAAATGTCTCAAATTCTATGTCATCAAATATGCCTAACGGAACTGTGAAAGCTGATAGTTTTAATCCTTTATCTACCTCTGGATCTGACAAAACTGAAACTTCTTTAAAGGAGAAAATCACTGCTGTCGACAAGGTGCCACATAATTTGCCTTCTCCAGAGGGAGGACATCTGCTGCCTGATAGTAGAAAGGGAGATACACTTCTGCCTAGTACAGGGCCAAATGCCAGTTCACGGGAGCATGAGGCTGATGATAAGGCTGATATAGGGCAAGTGGATAGAATTGAGAGAAGTGAAAACATTTCTAATACTTCTTTGGGTGCTTTTAGCATTAAAGATGTAAAGAATGATTTTGATTGTCCGAAGGCAGATGATTTTGTCCATGGCTTGCGTGGTAGTCCAAATAATGACAAGGCTTCTGACGCTAAGTCACCAAATAGAATTACATTTGCTGACATTAATAATGGTGATGATGTTAATATGCAACTTTGTCAGAATGAAGCCTCCCTATCACCTCACCACTATTCTAATGTGCAATATTTAGATAATCAGTTTCAGGTAGAAGATGACAAGAACAGCAGACTGTCAGCATTGGCTGAGAGTGTAATCAATACAGATGTTATAAACACATGTAATTCTGCTGATGTTAGTCTGGCTTGCTTGAGTTATAATGATCTTACTGGTAATGCACAAAAGAACATTACAGGTTCTGATTTTGAAAATGATGGCAAGGAAGATTGCAAAACTAAAGCCCTTACTTTATCTGAAAATGTTATTTTGGAAGAAAACCCAGAGACTTGCTCCCCCGTGCCAAGTGGTGGAATGGATAGTCAAATGGATAGTCTTTCAAGTTCTGTGGAAACTAGGATTTCAGATGGTCAAGAATGCCCAAAACCTTCAAGATTACCAATTCATGTTTCTGATAACAGCCTCACTAATTCAGAAGAGAATATCATGACTCCCCATAGTGTTATTGTCAAAGATTCTGGAAAGGAGGCATCCCCTGTGGATGTCACTGCATCTCCTGGGAATTGTACCACTGAACAGTCTCCAAATGCTAATTCTTTGGTTAGATATGCTGAAGGAGATGCAAATATGTCTAAAAAAAGAAAAGTTGAGACACATTTAAATTTTTCAAGTTCAGATTTCGGGGGCATATCTCCAGAGCCTATGCATACGGTTAGCCTTGCAAATGTGCATGCAACCTTAAGTTTGTCAAAAAATTCAAGTGTGTCAGAAGTTTTAAATCCATATGTTCGAAGCTCAGATTTTTGCTTACAATCCAGCACAGGTGGGGTTACTGTTTTACATGGGAAAGGGGAGGTTTCAGAGACGGAAGTTTACTTTGGACATAGTGGCAGTAACAGCGCAAATAGGACTTCACCAATGTTTAAAACTAGTAGTCACATGAATGTCACTTTATTGCAAGCTGAACTTTGTGATGCAATTGTGGTTGCCACATCTTGTGCAGAAGTTCCTATTAGTATTAGTGATAACAACACGCACCAGAAAGAGGTCGAATTTTCTAGCATGGTTAAACCTTCTGCTTCTCTATCCCTGCCTTATCCTGAGAGTAGTGCTAAATTGTACAAGAATAGCTTGTTTGGAGAATCTGTTGGGTCTATGGATGCAAATACAAATATTACAAAATTTGAATGCTCCCAGTTGCAGCACCCAGCCATCAACTGTCATTTGCATGAGGATGTGGCTATTCCAAACGATCAGTTTCCATTGTTGGAAAATGAGCAGAAAGAAATTCTCTCCCTGTTGTGCCTTAGGACTTCAGATTGTCAAACAATCCAAAATGAAAGCATTCAAGGGGATGAAAATGATGCGGATAGCACATCTAAGGTTGAACAGGATTGTGACTTAGCTGCTTGTACATCATATTCACAGAACACTATAGAGAATATAAAGTCAAGTCCTGCAGCCAGAAGTGATAACTTGATCACAAGGAAGATGATGCCTCAACCTTTGCAAGTTGATTCCAGAGTTTCAAAACTTCGAACTTGGCATCGTACAGGTAATAATTCTGGTTCTCTACCAGGAAATAATCCTTTGGCAGGATCTGTGCCTCCCAGAAGGTCAGTTTCAGAAAAGAAGGGGAACTTTCAAAATACTTCTTACATTCGTAAAGGTAACAGTCTTGTAAGGAAACATACTTCTGTTTCTGCTTCACCACAATGCACTGCTAATCAGTCTTCTTCTTTGGGGTTTGATGAGTCTCATAAGAGCACTGGATCTGAAATTATGGTTGATATCTCAAATCACACCAATCTCTTGAAATCAGGATTGACACCCGCTTCTCTGGAGGGGCAAAGAACGCCTCCTCTACCTGTTGACACTAAATTACCTAATCATATGGCAACAGCATGTGAGGAGAATAAATCTTCCTCGTTAATAGAACCCCTTTCCAATGCTTTCCGTGATAGTGCATCTGAACCTAGAAACTTTACGGAGCCTTGTGATGCTCCAAATTCTGATGATGCGCTGAAGTCGGATGAAACTGTTGAAAACCTAACTTTTCCATCAAACAACGTGGAGAGCCAAGTTGAAGCACGTGATGAGCATGTGTCTTTGAATTCAAAGAGAATAGTCTATGTAAAGCGCAAATCAAATCAGTTGGTTGCAACTTCAAATTCTTGTGAACTTCCTGTTGCTACTGATGACAATGTCCAGATGGCCTCTTCCGATGGGTACTACAAGAGGAGCAACAATCAGTTAGTTAGGACTACATTTGAAAGTCAAATCAACCAGACAGTTGCAATGCCCACTGTAAACTCTGATAGGCACAGGGCCCGTAAGGCTGGTTACAACAGGAGGTTTGGTAAGAGGCGGTCACTAAAGGTTGTTGGAAGTTCATGCAAACCTTTGAGAGCCTCATTGGTGTGGACACTCTGTGGTGCAAGTTCATCCAAAAACGATAATGACTCTCAGCATCATCCGAAAGTTCTGCCTCAGTTTTTTCCATGGAAAAGAGCAACATACTTAAGGAGCTTCATTTATAATCCTGCTTTGAGCTCCAATACTAATTCGTTATCTGCAATCAGCAAGAAATTGGTTCTGTCGAGAAAGAGGAATACTGTTTATACTAGGTCAACCCATGGATTTTCCCTTCGGAAATCCAAGGTGTTAGGCGTTGGCGGATCTAGTCTAAAATGGTCAAAATCAATTGAGAAGTCTTCAAAGAAAGTTAACGAGGAAGCCACACTTGCAGTTGCTGCTGTAGAGAAGAAAAGGAGGGAACAGAAAGATGGTGCTTGTATCAGCTCTCGGGCAAAGAGAGAACGTATATTTCGTATTGGGTTGGTTCGTTACAGAATGGACTCTTCGGGGAGGACACTTCAAAGGATTTCAGCTGATGAGCCCCTACCCTCTGCTTCTCTCCGTCCAGGTTTGCATGTGAAAAGTTCATACATTCCAAGGAGATTAGTGATTGGAAATGATGAGTATGTCCGAATTGGCAATGGCCATAAGCTTATCAGAGACCCAAAGAAGCGAACTCGTATATTGGCTAATGAAATTAGGTGGAGTTTACACACAGCTAGACAACGGTTGGCTCGGAAGCAGAAGTATTGTCAATTCTTTACTAGATTTGGGAAATGTAACAAGGATGACAGGAAGTGTCCCTATATTCATGATCCCTCTAAAATTGCTGTCTGTACTAAGTTTCTGAATGGTTTATGCTCCACTCCCAACTGCAAATTGACTCATAAGGTTATTCCCGAGAGAATGCCTGATTGCTCTTATTTTTTGCAAGGTTTATGCACAAATAGAAATTGCCCCTATAGACATGTTAATGTGAACCCTAAGGCATCCGTTTGTGAAGGATTCCGGGGATATTGTGCTGATGGCAATGAGTGTCGGAAGAAGCACACCTATGTCTGCCCTACGTTTCAAGCAACAGGAAGCTGCACCCAAGGGAGCAAGTGCAAACTTCATCACCCCCAAAAACAAGGAAGGGAAAGAAAAGGAAGAGATGCGTGGATCAGAGGAACTGTAAGGCGATATTTTGGTTCTTTATGGATTGATGTTTCTGAACCTGGGACGATGGTTGTAGCTCCAAGGCAAGGGGAACAAAATAAGGATGGCCTTGAAGGAGAACTTGCTGACTATATCAGTCTAGATGTCGAGGATGAAGACGTTGCTGAACTTCCGGGACGAGCAAGGGAGCAATCAACATTGTGTGATGGTGAACCTGGGGACATAGTATTGGATGATGAGGATGAACTCATTAAACCAGTTCTGATAATGAAAAAGGATATTAGGGCCAAGACATCTCCTGTCTGA 6000 0.4243 MDHSSHFHHQHQHQNQHARYAPLPPNHPRHSQFPEDPCLRPHQLPPPPPPQAPTLPPPPPPPSLSYRTVRNTPPTHPHPYNPPHQSQFSFKAPNYANRPVEEERPVSSSHPHDFTHSQRVSNRMIIDDDRPRHSLPDFDYRNNDNRIGGWNPLRVVSDNRPSRPYPPIDFDRQLYHQHPLNHKIAAPYPPVDKVRYNSEGNSRGRVDHIDRYEVKTREEFAWGRGDEKYHRRRDSGSNLHASSGDFGIMSSQSTLSRDLDSKNGDYVHHGVERDNEISRGTRRDGLGDSKRWVNDRKGPRDPHSSSFELVNNENGGDGIRLTSGKYYGSELGRYNNRGNRESGHEFSRAPKKQIQKKSALLRIQMVKPNHKNREIEQLQYTSHGDDTNSNSFRGKDQFEYSGYGVKAEERERSPVELDISFKSNSLVAKAIVAPSSSAISDVDITSVSDTDFVPAEKGKNSLVSDSDSPGLKPAKPSMAAVNLGGSPCKVNCIPSSSKEFNLQKKVSDSCSRRCAGVPTNCDVKNEGAQTPKGIVSHEITNSCSVKTHPRVAKKKKIVKKVVKKVVSNPKLNVSNSMSSNMPNGTVKADSFNPLSTSGSDKTETSLKEKITAVDKVPHNLPSPEGGHLLPDSRKGDTLLPSTGPNASSREHEADDKADIGQVDRIERSENISNTSLGAFSIKDVKNDFDCPKADDFVHGLRGSPNNDKASDAKSPNRITFADINNGDDVNMQLCQNEASLSPHHYSNVQYLDNQFQVEDDKNSRLSALAESVINTDVINTCNSADVSLACLSYNDLTGNAQKNITGSDFENDGKEDCKTKALTLSENVILEENPETCSPVPSGGMDSQMDSLSSSVETRISDGQECPKPSRLPIHVSDNSLTNSEENIMTPHSVIVKDSGKEASPVDVTASPGNCTTEQSPNANSLVRYAEGDANMSKKRKVETHLNFSSSDFGGISPEPMHTVSLANVHATLSLSKNSSVSEVLNPYVRSSDFCLQSSTGGVTVLHGKGEVSETEVYFGHSGSNSANRTSPMFKTSSHMNVTLLQAELCDAIVVATSCAEVPISISDNNTHQKEVEFSSMVKPSASLSLPYPESSAKLYKNSLFGESVGSMDANTNITKFECSQLQHPAINCHLHEDVAIPNDQFPLLENEQKEILSLLCLRTSDCQTIQNESIQGDENDADSTSKVEQDCDLAACTSYSQNTIENIKSSPAARSDNLITRKMMPQPLQVDSRVSKLRTWHRTGNNSGSLPGNNPLAGSVPPRRSVSEKKGNFQNTSYIRKGNSLVRKHTSVSASPQCTANQSSSLGFDESHKSTGSEIMVDISNHTNLLKSGLTPASLEGQRTPPLPVDTKLPNHMATACEENKSSSLIEPLSNAFRDSASEPRNFTEPCDAPNSDDALKSDETVENLTFPSNNVESQVEARDEHVSLNSKRIVYVKRKSNQLVATSNSCELPVATDDNVQMASSDGYYKRSNNQLVRTTFESQINQTVAMPTVNSDRHRARKAGYNRRFGKRRSLKVVGSSCKPLRASLVWTLCGASSSKNDNDSQHHPKVLPQFFPWKRATYLRSFIYNPALSSNTNSLSAISKKLVLSRKRNTVYTRSTHGFSLRKSKVLGVGGSSLKWSKSIEKSSKKVNEEATLAVAAVEKKRREQKDGACISSRAKRERIFRIGLVRYRMDSSGRTLQRISADEPLPSASLRPGLHVKSSYIPRRLVIGNDEYVRIGNGHKLIRDPKKRTRILANEKXRWSLHTARQRLARKQKYCQFFTRFGKCNKDDRKCPYIHDPSKIAVCTKFLNGLCSTPNCKLTHKVIPERMPDCSYFLQGLCTNRNCPYRHVNVNPKASVCEGFLXGYCADGNECRKKHTYVCPTFQATGSCTQGSKCKLHHPQKQGRERKGRDAWIRGTVRRYFGSLWIDVSEPGTMVVAPRQGEQNKDGLEGELADYISLDVEDEDVAELPGRAREQSTLCDGEPGDIVLDDEDELIKPVLIMKKDIRAKTSPV 2001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral830g00001 2001 FunFam zinc finger CCCH domain-containing protein 3 1788 1839 - -
Pral830g00001 2001 SMART c3hfinal6 1787 1811 IPR000571 GO:0046872
Pral830g00001 2001 SMART c3hfinal6 1813 1838 IPR000571 GO:0046872
Pral830g00001 2001 SMART c3hfinal6 1840 1866 IPR000571 GO:0046872
Pral830g00001 2001 SMART c3hfinal6 1867 1889 IPR000571 GO:0046872
Pral830g00001 2001 SMART c3hfinal6 1758 1786 IPR000571 GO:0046872
Pral830g00001 2001 MobiDBLite consensus disorder prediction 569 657 - -
Pral830g00001 2001 MobiDBLite consensus disorder prediction 1241 1275 - -
Pral830g00001 2001 MobiDBLite consensus disorder prediction 337 352 - -
Pral830g00001 2001 FunFam Zinc finger CCCH domain-containing protein 7 1841 1900 - -
Pral830g00001 2001 MobiDBLite consensus disorder prediction 455 478 - -
Pral830g00001 2001 MobiDBLite consensus disorder prediction 569 601 - -
Pral830g00001 2001 MobiDBLite consensus disorder prediction 1288 1312 - -
Pral830g00001 2001 ProSiteProfiles Zinc finger C3H1-type profile. 1758 1787 IPR000571 GO:0046872
Pral830g00001 2001 Gene3D - 1840 1898 - -
Pral830g00001 2001 PANTHER CCCH ZINGC FINGER 340 1993 - -
Pral830g00001 2001 ProSiteProfiles Zinc finger C3H1-type profile. 1862 1890 IPR000571 GO:0046872
Pral830g00001 2001 MobiDBLite consensus disorder prediction 229 352 - -
Pral830g00001 2001 MobiDBLite consensus disorder prediction 1379 1401 - -
Pral830g00001 2001 Gene3D - 1785 1839 - -
Pral830g00001 2001 MobiDBLite consensus disorder prediction 1241 1255 - -
Pral830g00001 2001 ProSiteProfiles Zinc finger C3H1-type profile. 1813 1839 IPR000571 GO:0046872
Pral830g00001 2001 MobiDBLite consensus disorder prediction 239 260 - -
Pral830g00001 2001 MobiDBLite consensus disorder prediction 261 303 - -
Pral830g00001 2001 MobiDBLite consensus disorder prediction 1 124 - -
Pral830g00001 2001 MobiDBLite consensus disorder prediction 183 202 - -
Pral830g00001 2001 MobiDBLite consensus disorder prediction 39 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral830g00001 Pral-Chr830 317 9533 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral830g00001 1764 1927 C2H2 Transcription Factor Family AT2G32930 28.824 1.21e-06 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pral830g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral830g00001 - - pcin:129303221 1756.5