Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral81g00002 ATGTGCAGCTTCACTTTCTTTCAACGGGTATCTAGAGCTTTTCACGACCATTCCTCGCATTTCAAACTTGTCGTCCTCTGCACCGTAAGTGGAGGCGGTCTTTTGGCTTATGCGGAGGCTGCTTCATCTGGAACAATCAACGACAAGAAGGTGTTGGTGCTGGGAACCGGTTGGGCAGGCACAAGCTTTTTGAAGAATCTCAATAACCCGAGATACGAGGTTCAGGTGGTATCGCCTCGTAATTATTTTGCATTCACCCCCTTGCTTCCTAGTGTTACATGCGGTACGGTCGAAGCACGCAGCATTGTTGAACCCGTTCGCAATTTTTTCAGGAAGAAAAAGGTCGACTTTCAATTCAGTGAAGCAGAATGCGTGAAGATTGATGCAGAAAACAGGAAAGTTTACTGCCGATCCAGTGTAGAAAATAATTTGAAGGAGAAAGAAGAATTCGTTTTGGATTATGACTACCTCATCATAGCCGTGGGAGCTAATGTCAACACATTCAATACTCCGGGAGTGGTGGAGAATTGTCTTTTCTTGAAGGAAGTAGAAGATGCTCAAAAAATCAGAAGAGCAGTTATTGACTGCTTTGAGAGAGCAAGTCTGCCAAATGTTAGCGAAGAAGATAAGATGAGAATTCTTCATTTTGCTGTTGTCGGAGGTGGCCCAACTGGAGTGGAATTTGCAGCATCACTTCATGATTTCGTTAATGAGGATCTGGTCAAATTATATCCCAAGATAAAAGATTTTGTTAAAATCACACTTCTGGAGGCAGGAGATCACATTTTAGGAATGTTTGACAAAAGAATCACTGCTTTTGCTGAAGAAAAGTTTCGAAGAGATGGTATAAATGTGAAAACAGGATCCATGGTCGTGAAAGTGTCTGAGAAAGAAATCTCTACTAAAGAAATGAAAAATGGAGGAAAAATTTCTGCTATTCCTTATGGAATGGCTGTCTGGTCAACTGGTATTGGCACTCGTCCGTTCATTAAAGATTTCATGGAGCAAATTGGTCAGGCTAACAGGCGTGCTGTAGCTACAGATGAATGGTTGAGAGTTGAGGGATGCGACAATGTGTATGCACTTGGTGATTGTGCTACAATAAACCAGCGAAAAGTCATGGAAGATATTTCTTCAATCTTTAAGAAGGCTGACAAAGACAATTCAGGAACACTTACGGTCAGAGAGTTTCAAGAGGTCATTGATGATATCTGTGAAAGATACCCTCAGGTTGAGCTATATTTGAAGAATAAGCAGATGAGCAGTATTGCTGATCTTTTGAAGGAATCCAAGGAAGATGGTGAAAATGAATCCGTTGAACTGAATATTGAAGAATTGAAGACCGCACTTTCCAATGTGGATTCTCAGATGAAATTTCTTCCTGCTACTGCACAGGTTGCTTCTCAACAAGGTGCCTACCTAGCCAAGTGTTTCAACCGGATGGAAGAGTGTGAGAGAAATCCAGAGGGTCCTCTCAGATTCAGGGGAGAGGGTCGCCATCGGTTCAAACCCTTTAGGTACAAGCATTTTGGGCAATTTGCTCCTCTTGGAGGGGAGCAGACAGCTGCGCAGCTTCCTGGGGATTGGGTATCAATAGGCCGCAGCACCCAATGGCTATGGTATTCTGTGTATGCAAGCAAGCAAGTGAGCTGGCGCACTAGGGCCCTAGTGGTATCAGACTGGACAAGACGTTTTATTTTTGGGAGGGACTCAAGTCAAATCTGA 1725 0.433 MCSFTFFQRVSRAFHDHSSHFKLVVLCTVSGGGLLAYAEAASSGTINDKKVLVLGTGWAGTSFLKNLNNPRYEVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNFFRKKKVDFQFSEAECVKIDAENRKVYCRSSVENNLKEKEEFVLDYDYLIIAVGANVNTFNTPGVVENCLFLKEVEDAQKIRRAVIDCFERASLPNVSEEDKMRILHFAVVGGGPTGVEFAASLHDFVNEDLVKLYPKIKDFVKITLLEAGDHILGMFDKRITAFAEEKFRRDGINVKTGSMVVKVSEKEISTKEMKNGGKISAIPYGMAVWSTGIGTRPFIKDFMEQIGQANRRAVATDEWLRVEGCDNVYALGDCATINQRKVMEDISSIFKKADKDNSGTLTVREFQEVIDDICERYPQVELYLKNKQMSSIADLLKESKEDGENESVELNIEELKTALSNVDSQMKFLPATAQVASQQGAYLAKCFNRMEECERNPEGPLRFRGEGRHRFKPFRYKHFGQFAPLGGEQTAAQLPGDWVSIGRSTQWLWYSVYASKQVSWRTRALVVSDWTRRFIFGRDSSQI 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral81g00002 574 Gene3D - 416 573 - -
Pral81g00002 574 Gene3D - 41 403 - -
Pral81g00002 574 SUPERFAMILY FAD/NAD(P)-binding domain 215 369 IPR036188 -
Pral81g00002 574 ProSitePatterns EF-hand calcium-binding domain. 385 397 IPR018247 -
Pral81g00002 574 ProSiteProfiles EF-hand calcium-binding domain profile. 372 407 IPR002048 GO:0005509
Pral81g00002 574 SUPERFAMILY EF-hand 330 461 IPR011992 -
Pral81g00002 574 PANTHER NADH DEHYDROGENASE 44 574 IPR045024 GO:0003954|GO:0006116
Pral81g00002 574 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 39 401 - -
Pral81g00002 574 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 418 573 - -
Pral81g00002 574 SUPERFAMILY FAD/NAD(P)-binding domain 48 267 IPR036188 -
Pral81g00002 574 PRINTS FAD-dependent pyridine nucleotide reductase signature 51 70 - -
Pral81g00002 574 PRINTS FAD-dependent pyridine nucleotide reductase signature 154 172 - -
Pral81g00002 574 PRINTS FAD-dependent pyridine nucleotide reductase signature 215 233 - -
Pral81g00002 574 Pfam Pyridine nucleotide-disulphide oxidoreductase 49 374 IPR023753 GO:0016491
Pral81g00002 574 Coils Coil 436 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral81g00002 Pral-Chr81 88265 111814 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral81g00002 1 574 Chloroplast and Mitochondria Gene Families AT4G21490 73.024 0.0 871
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral81g00002 K03885 - gmx:100800518 1006.9