Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral81g00001 ATGTGCAGCTTCACTTTCTTTCAACGGGTATCTAGAGCTTTTCACGACCATTCCTCGCATTTCAAACTTGTCGTCCTCTGCACCGTAAGTGGAGGCGGTCTTTTGGCTTATGCGGAGGCTGCTTCATCTGGAACAATCAACGACAAGAAGGTGTTGGTGCTGGGAACCGGTTGGGCAGGCACAAGCTTTTTGAAGAATCTCAATAACCCGAGATACGAGGTTCAGGAAGGTGACGAAAAAGCCTGTTGGACTAAATTTCTACTGCTGCAGAGTTTAATCGTTAAAAAGGTCGACTTTCAATTCAGTGAAGCAGAATGCGTGAAGATTGATGCAGAAAACAGGAAAGTTTACTGCCGATCCAGTGTAGAAAATAATTTGAAGGAGAAAGAAGAATTCGTTTTGGATTATGACTACCTCATCATAGCCGTGGGAGCTAATGTCAACACATTCAATACTCCGGGAGTGGTGGAGAATTGTCTTTTCTTGAAGGAAGTAGAAGATGCTCAAAAAATCAGAAGAGCAGTTATTGACTGCTTTGAGAGAGCAAGTCTGCCAAATGTTAGCGAAGAAGATAAGATGAGAATTCTTCATTTTGCTGTTGTCGGAGGTGGCCCAACTGGAGTGGAATTTGCAGCATCACTTCATGATTTCGTTAATGAGGATCTGGTCAAATTATATCCCAAGATAAAAGATTTTGTTAAAATCACACTTCTGGAGGCAGGAGATCACATTTTAGGAATGTTTGACAAAAGAATCACTGCTTTTGCTGAAGAAAAGTTTCGAAGAGATGGTATAAATGTGAAAACAGGATCCATGGTCGTGAAAGTGTCTGAGAAAGAAATCTCTACTAAAGAAATGAAAAATGGAGGAAAAATTTCTGCTATTCCTTATGGAATGGCTGTCTGGTCAACTGGTATTGGCACTCGTCCGTTCATTAAAGATTTCATGGAGCAAATTGGTCAGGCTAACAGGCGTGCTGTAGCTACAGATGAATGGTTGAGAGTTGAGGGATGCGACAATGTGTATGCACTTGGTGATTGTGCTACAATAAACCAGCGAAAAGTCATGGAAGATATTTCTTCAATCTTTAAGAAGGCTGACAAAGACAATTCAGGAACACTTACGGTCAGAGAGTTTCAAGAGGTCATTGATGATATCTGTGAAAGATACCCTCAGGTTGAGCTATATTTGAAGAATAAGCAGATGAGCAGTATTGCTGATCTTTTGAAGGAATCCAAGGAAGATGGTGAAAATGAATCCGTTGAACTGAATATTGAAGAATTGAAGACCGCACTTTCCAATGTGGATTCTCAGATGAAATTTCTTCCTGCTACTGCACAGGTTGCTTCTCAACAAGGTGCCTACCTAGCCAAGTGTTTCAACCGGATGGAAGAGTGTGAGAGAAATCCAGAGGGTCCTCTCAGATTCAGGGGAGAGGGTCGCCATCGGTTCAAACCCTTTAGGTACAAGCATTTTGGGCAATTTGCTCCTCTTGGAGGGGAGCAGACAGCTGCGCAGCTTCCTGGGGATTGGGTATCAATAGGCCGCAGCACCCAATGGCTATGGTATTCTGTGTATGCAAGCAAGCAAGTGAGCTGGCGCACTAGGGCCCTAGTGGTATCAGACTGGACAAGACGTTTTATTTTTGGGAGGGACTCAAGTCAAATCTGA 1671 0.4291 MCSFTFFQRVSRAFHDHSSHFKLVVLCTVSGGGLLAYAEAASSGTINDKKVLVLGTGWAGTSFLKNLNNPRYEVQEGDEKACWTKFLLLQSLIVKKVDFQFSEAECVKIDAENRKVYCRSSVENNLKEKEEFVLDYDYLIIAVGANVNTFNTPGVVENCLFLKEVEDAQKIRRAVIDCFERASLPNVSEEDKMRILHFAVVGGGPTGVEFAASLHDFVNEDLVKLYPKIKDFVKITLLEAGDHILGMFDKRITAFAEEKFRRDGINVKTGSMVVKVSEKEISTKEMKNGGKISAIPYGMAVWSTGIGTRPFIKDFMEQIGQANRRAVATDEWLRVEGCDNVYALGDCATINQRKVMEDISSIFKKADKDNSGTLTVREFQEVIDDICERYPQVELYLKNKQMSSIADLLKESKEDGENESVELNIEELKTALSNVDSQMKFLPATAQVASQQGAYLAKCFNRMEECERNPEGPLRFRGEGRHRFKPFRYKHFGQFAPLGGEQTAAQLPGDWVSIGRSTQWLWYSVYASKQVSWRTRALVVSDWTRRFIFGRDSSQI 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral81g00001 556 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 400 555 - -
Pral81g00001 556 ProSiteProfiles EF-hand calcium-binding domain profile. 354 389 IPR002048 GO:0005509
Pral81g00001 556 Pfam Pyridine nucleotide-disulphide oxidoreductase 49 356 IPR023753 GO:0016491
Pral81g00001 556 SUPERFAMILY EF-hand 312 443 IPR011992 -
Pral81g00001 556 SUPERFAMILY FAD/NAD(P)-binding domain 47 350 IPR036188 -
Pral81g00001 556 Gene3D - 398 555 - -
Pral81g00001 556 Gene3D - 41 385 - -
Pral81g00001 556 PANTHER NADH DEHYDROGENASE 43 556 IPR045024 GO:0003954|GO:0006116
Pral81g00001 556 PRINTS FAD-dependent pyridine nucleotide reductase signature 197 215 - -
Pral81g00001 556 PRINTS FAD-dependent pyridine nucleotide reductase signature 51 70 - -
Pral81g00001 556 PRINTS FAD-dependent pyridine nucleotide reductase signature 136 154 - -
Pral81g00001 556 ProSitePatterns EF-hand calcium-binding domain. 367 379 IPR018247 -
Pral81g00001 556 Coils Coil 418 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral81g00001 Pral-Chr81 88265 111814 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral81g00001 1 556 Chloroplast and Mitochondria Gene Families AT4G21490 68.330 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral81g00001 K03885 - gmx:100800518 922.154